SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001024843
Gene Symbol: TNRC6B
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr22:g.40332615C>T COSN5771338 HX33T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6732-3p tgCAGGGTTgcacag UAACCCUG m7b (m6b->m7b) HPKMA_9710_G11243.1_40728639
hsa-miR-4690-3p tgcaGGGCTGCacag GCAGCCCA m7a Disrupted HPKMA_9710_G11243.1_40728639
hsa-miR-6779-3p tgCAGGGCTgcacag AAGCCCUG m7b (m7b->m6b) HPKMA_9710_G11243.1_40728639
hsa-miR-6799-3p tGCAGGGCtgcacag UGCCCUGC m7b Disrupted HPKMA_9710_G11243.1_40728639
hsa-miR-7156-3p tgcagGGCTGCAcag CUGCAGCC m7b Disrupted HPKMA_9710_G11243.1_40728639
hsa-miR-143-5p tgcagggCTGCACag GGUGCAGU m6b Disrupted HPKMA_9710_G11243.1_40728639
hsa-miR-3173-5p tGCAGGGCtgcacag UGCCCUGC m7b Disrupted HPKMA_9710_G11243.1_40728639
hsa-miR-3944-5p tgcaggGCTGCACAg UGUGCAGC m8a Disrupted HPKMA_9710_G11243.1_40728639

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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