SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001024843
Gene Symbol: TNRC6B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.40335016T>C COSN5771339 HX21T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548ag agTTACCTTTaagtg AAAGGUAA m8a Disrupted HPCB1_25871_G32821.1_40731043
hsa-miR-548ai agTTACCTTTaagtg AAAGGUAA m8a Disrupted HPCB1_25871_G32821.1_40731043
hsa-miR-548m agtTACCTTTaagtg CAAAGGUA m7b Disrupted HPCB1_25871_G32821.1_40731043
hsa-miR-6892-5p agttaCCCTTAagtg GUAAGGGA m6b Created HPCB1_25871_G32821.1_40731043
hsa-miR-570-5p agTTACCTTTaagtg AAAGGUAA m8a Disrupted HPCB1_25871_G32821.1_40731043
hsa-miR-548ba agTTACCTTTaagtg AAAGGUAA m8a Disrupted HPCB1_25871_G32821.1_40731043

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40327342A>G COSN1899290 RK100_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4729 aATAAATGAacaaac UCAUUUAU m8a (m7a->m8a) HPCB1_25860_G32810.1_40723354
hsa-miR-6853-3p aataAATGAACAaac UGUUCAUU m8a Created HPCB1_25860_G32810.1_40723354
hsa-miR-6739-3p aataaatGAACAAac AUUGUUCU m6b Created HPCB1_25860_G32810.1_40723354
hsa-miR-5696 aaTAAATGAacaaac CUCAUUUA m7b (m6b->m7b) HPCB1_25860_G32810.1_40723354
hsa-miR-1206 aataaATGAACAaac UGUUCAUG m7a Created HPCB1_25860_G32810.1_40723354
Mutation Mutation ID Sample Name Cancer Type
chr22:g.40327340A>G COSN1899289 RK007_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr22:g.40323328C>T COSN10030680 C0061T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-137 caacttGCAATAAat UUAUUGCU m7a Disrupted HPCB1_25843_G32793.1_40719329
hsa-miR-25-3p caactTGCAATaaat CAUUGCAC m6b Disrupted HPCB1_25843_G32793.1_40719329
hsa-miR-32-5p caactTGCAATAaat UAUUGCAC m7a Disrupted HPCB1_25843_G32793.1_40719329
hsa-miR-363-3p caactTGCAATaaat AAUUGCAC m6b Disrupted HPCB1_25843_G32793.1_40719329
hsa-miR-367-3p caactTGCAATaaat AAUUGCAC m6b Disrupted HPCB1_25843_G32793.1_40719329
hsa-miR-556-3p caacttGTAATAaat AUAUUACC m6b Created HPCB1_25843_G32793.1_40719329
hsa-miR-6504-3p caactTGTAATaaat CAUUACAG m6b Created HPCB1_25843_G32793.1_40719329
hsa-miR-6882-5p caACTTGTAataaat UACAAGUC m7a (m6a->m7a) HPCB1_25843_G32793.1_40719329
hsa-miR-92a-3p caactTGCAATAaat UAUUGCAC m7a Disrupted HPCB1_25843_G32793.1_40719329
hsa-miR-92b-3p caactTGCAATAaat UAUUGCAC m7a Disrupted HPCB1_25843_G32793.1_40719329

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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