SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001024843
Gene Symbol: TNRC6B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.40334178C>T COSN8010738 PCSI_0083_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-519c-3p atctcTGCACTTctt AAAGUGCA m7b Disrupted HHSJI_1835_Peak34679|9|0.1607|4|NM_001024843|TNRC6B
hsa-miR-519b-3p atctcTGCACTTctt AAAGUGCA m7b Disrupted HHSJI_1835_Peak34679|9|0.1607|4|NM_001024843|TNRC6B
hsa-miR-519a-3p atctcTGCACTTctt AAAGUGCA m7b Disrupted HHSJI_1835_Peak34679|9|0.1607|4|NM_001024843|TNRC6B
hsa-miR-4797-5p atCTCTGTacttctt GACAGAGU m6b Created HHSJI_1835_Peak34679|9|0.1607|4|NM_001024843|TNRC6B
hsa-miR-3919 aTCTCTGCacttctt GCAGAGAA m7a Disrupted HHSJI_1835_Peak34679|9|0.1607|4|NM_001024843|TNRC6B
hsa-miR-3678-3p atCTCTGCActtctt CUGCAGAG m7b (m7b->m6b) HHSJI_1835_Peak34679|9|0.1607|4|NM_001024843|TNRC6B
hsa-miR-5585-5p atctctGTACTTCtt UGAAGUAC m7b Created HHSJI_1835_Peak34679|9|0.1607|4|NM_001024843|TNRC6B
hsa-miR-2467-3p atCTCTGCacttctt AGCAGAGG m6b Disrupted HHSJI_1835_Peak34679|9|0.1607|4|NM_001024843|TNRC6B

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40334160G>C COSN8612743 4537_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-1-3p tcccaAAGGGCTTtg AAGCCCUU m8a Disrupted HHSJI_1835_Peak34679|9|0.1607|4|NM_001024843|TNRC6B
hsa-miR-129-2-3p tcccaAAGGGCTTtg AAGCCCUU m8a Disrupted HHSJI_1835_Peak34679|9|0.1607|4|NM_001024843|TNRC6B
hsa-miR-6740-5p tCCCAAACggctttg AGUUUGGG m7b Created HHSJI_1835_Peak34679|9|0.1607|4|NM_001024843|TNRC6B

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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