SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001024843
Gene Symbol: TNRC6B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.40335692T>G COSN8612744 381_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-3p tttaTTTGGGaaaga GCCCAAAG m6b Created HHRBL_9581_BCBL1-2of3-SCL_1605

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40335016T>C COSN5771339 HX21T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548ag agTTACCTTTaagtg AAAGGUAA m8a Disrupted HHRBL_9579_BCBL1-2of3-SCL_3900
hsa-miR-548ai agTTACCTTTaagtg AAAGGUAA m8a Disrupted HHRBL_9579_BCBL1-2of3-SCL_3900
hsa-miR-548ba agTTACCTTTaagtg AAAGGUAA m8a Disrupted HHRBL_9579_BCBL1-2of3-SCL_3900
hsa-miR-548m agtTACCTTTaagtg CAAAGGUA m7b Disrupted HHRBL_9579_BCBL1-2of3-SCL_3900
hsa-miR-570-5p agTTACCTTTaagtg AAAGGUAA m8a Disrupted HHRBL_9579_BCBL1-2of3-SCL_3900
hsa-miR-6892-5p agttaCCCTTAagtg GUAAGGGA m6b Created HHRBL_9579_BCBL1-2of3-SCL_3900

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40335002CT>C COSN1899295 RK109_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1286 tgatgcTCCTGCAag UGCAGGAC m7a Created HHRBL_9579_BCBL1-2of3-SCL_3900
hsa-miR-2467-3p tgatgctCTCTGCaag AGCAGAGG m6b Disrupted HHRBL_9579_BCBL1-2of3-SCL_3900
hsa-miR-3678-3p tgatgctCTCTGCAag CUGCAGAG m7b Disrupted HHRBL_9579_BCBL1-2of3-SCL_3900
hsa-miR-3919 tgatgcTCTCTGCaag GCAGAGAA m7a Disrupted HHRBL_9579_BCBL1-2of3-SCL_3900
hsa-miR-4722-5p tgatgCTCCTGCaag GGCAGGAG m7b Created HHRBL_9579_BCBL1-2of3-SCL_3900
hsa-miR-6511b-5p tgatgctCCTGCAag CUGCAGGC m6b Created HHRBL_9579_BCBL1-2of3-SCL_3900
hsa-miR-6811-5p tgatgctCCTGCAag AUGCAGGC m6b Created HHRBL_9579_BCBL1-2of3-SCL_3900

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40325655G>A COSN1262158 HX4T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1301-5p tctgtgTAGAGCaaa CGCUCUAG m6b Created HHRBL_9576_BCBL1-2of3-SCL_1777
hsa-miR-5691 tctgtgtAGAGCAAa UUGCUCUG m7a Created HHRBL_9576_BCBL1-2of3-SCL_1777
hsa-miR-6502-5p tctgtgTAGAGCaaa AGCUCUAG m6b Created HHRBL_9576_BCBL1-2of3-SCL_1777
hsa-miR-6772-3p tctgtgtGGAGCAAa UUGCUCCU m7a Disrupted HHRBL_9576_BCBL1-2of3-SCL_1777
hsa-miR-6805-3p tctgtgtAGAGCAAa UUGCUCUG m7a Created HHRBL_9576_BCBL1-2of3-SCL_1777

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40322918C>G COSM726231 TCGA-60-2698-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1202 ccgctttCTGGCACa GUGCCAGC m7a Disrupted HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-1227-3p ccgctttGTGGCACa CGUGCCAC m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-3064-3p ccgcttTGTGGCAca UUGCCACA m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-4715-3p ccgctttGTGGCACa GUGCCACC m7a Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-1202 ccgctttCTGGCACa GUGCCAGC m7a Disrupted HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-1227-3p ccgctttGTGGCACa CGUGCCAC m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-3064-3p ccgcttTGTGGCAca UUGCCACA m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-4715-3p ccgctttGTGGCACa GUGCCACC m7a Created HHRBL_9572_BCBL1-2of3-SCL_3624

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40322913G>A COSM3152751 SNU-175 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4796-3p gtcagCCACTTTctg UAAAGUGG m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-4796-3p gtcagCCACTTTctg UAAAGUGG m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40322912C>G COSM3554824 TCGA-DA-A1I1-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6825-3p aGTCAGCGgctttct GCGCUGAC m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-6825-3p aGTCAGCGgctttct GCGCUGAC m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40322907T>C COSM1034415 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5580-5p gatgaAGCCAGCcgc UGCUGGCU m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-617 gatGAAGTCagccgc AGACUUCC m6b Disrupted HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-5580-5p gatgaAGCCAGCcgc UGCUGGCU m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-617 gatGAAGTCagccgc AGACUUCC m6b Disrupted HHRBL_9572_BCBL1-2of3-SCL_3624

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40322901A>G COSM1230026 587220 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-136-3p actGATGATGaagtc CAUCAUCG m7a Disrupted HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-412-3p actgatGGTGAAGTc ACUUCACC m8a Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-6754-3p actgatGGTGAAGtc UCUUCACC m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-136-3p actGATGATGaagtc CAUCAUCG m7a Disrupted HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-412-3p actgatGGTGAAGTc ACUUCACC m8a Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-6754-3p actgatGGTGAAGtc UCUUCACC m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40322879C>T COSM4498174 CSCC-31-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1193 tACCATCCttgctga GGGAUGGU m7b Disrupted HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-2392 taCCATCCTtgctga UAGGAUGG m7b (m7b->m6b) HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-4426 taCCATCTTtgctga GAAGAUGG m7b (m6b->m7b) HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-4647 taCCATCTTtgctga GAAGAUGG m7b (m6b->m7b) HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-4662b taCCATCTTTgctga AAAGAUGG m8a Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-545-3p taccatcTTTGCTGa UCAGCAAA m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-1193 tACCATCCttgctga GGGAUGGU m7b Disrupted HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-2392 taCCATCCTtgctga UAGGAUGG m7b (m7b->m6b) HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-4426 taCCATCTTtgctga GAAGAUGG m7b (m6b->m7b) HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-4647 taCCATCTTtgctga GAAGAUGG m7b (m6b->m7b) HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-4662b taCCATCTTTgctga AAAGAUGG m8a Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-545-3p taccatcTTTGCTGa UCAGCAAA m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40322873A>G COSM1230025 587220 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1193 aaacactACCATCCt GGGAUGGU m7b Disrupted HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-142-3p aaACACTACcatcct UGUAGUGU m7b (m7b->m6b) HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-34a-5p aaaCACTGCCAtcct UGGCAGUG m8a Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-34c-5p aaaCACTGCCatcct AGGCAGUG m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-449a aaaCACTGCCAtcct UGGCAGUG m8a Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-449b-5p aaaCACTGCCatcct AGGCAGUG m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-6073 aaaCACTACCatcct GGUAGUGA m7a Disrupted HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-6499-3p aaACACTGCcatcct AGCAGUGU m7b (m6b->m7b) HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-1193 aaacactACCATCCt GGGAUGGU m7b Disrupted HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-142-3p aaACACTACcatcct UGUAGUGU m7b (m7b->m6b) HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-34a-5p aaaCACTGCCAtcct UGGCAGUG m8a Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-34c-5p aaaCACTGCCatcct AGGCAGUG m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-449a aaaCACTGCCAtcct UGGCAGUG m8a Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-449b-5p aaaCACTGCCatcct AGGCAGUG m7b Created HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-6073 aaaCACTACCatcct GGUAGUGA m7a Disrupted HHRBL_9572_BCBL1-2of3-SCL_3624
hsa-miR-6499-3p aaACACTGCcatcct AGCAGUGU m7b (m6b->m7b) HHRBL_9572_BCBL1-2of3-SCL_3624

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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