SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001024843 |
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Gene Symbol: | TNRC6B |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr22:g.40334178C>T | COSN8010738 | PCSI_0083_Pa_P_526 | [pancreas][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-2467-3p | atCTCTGCacttctt | AGCAGAGG | m6b | Disrupted | HHHSE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058 |
hsa-miR-3678-3p | atCTCTGCActtctt | CUGCAGAG | m7b | (m7b->m6b) | HHHSE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058 |
hsa-miR-3919 | aTCTCTGCacttctt | GCAGAGAA | m7a | Disrupted | HHHSE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058 |
hsa-miR-4797-5p | atCTCTGTacttctt | GACAGAGU | m6b | Created | HHHSE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058 |
hsa-miR-519a-3p | atctcTGCACTTctt | AAAGUGCA | m7b | Disrupted | HHHSE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058 |
hsa-miR-519b-3p | atctcTGCACTTctt | AAAGUGCA | m7b | Disrupted | HHHSE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058 |
hsa-miR-519c-3p | atctcTGCACTTctt | AAAGUGCA | m7b | Disrupted | HHHSE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058 |
hsa-miR-5585-5p | atctctGTACTTCtt | UGAAGUAC | m7b | Created | HHHSE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr22:g.40325390C>G | COSN8018996 | 8034061 | [pancreas][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3154 | agCCCTTCTGgctta | CAGAAGGG | m8a | Disrupted | HHHSE_19463_TNRC6B|NM_015088|exon_utr3|-6.93098185292128|-0.260334117698561 |
hsa-miR-4457 | agcCCTTGTGgctta | UCACAAGG | m7b | Created | HHHSE_19463_TNRC6B|NM_015088|exon_utr3|-6.93098185292128|-0.260334117698561 |
hsa-miR-449b-3p | agccctTGTGGCTta | CAGCCACA | m7b | Created | HHHSE_19463_TNRC6B|NM_015088|exon_utr3|-6.93098185292128|-0.260334117698561 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr22:g.40324701G>A | COSN8612740 | 4000_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4635 | aCTTCAAGcgtttcc | UCUUGAAG | m7b | Disrupted | HHHSE_19459_TNRC6B|NM_015088|exon_utr3|-7.03324740999302|-0.20220128305588 |
hsa-miR-5707 | actTCAAACGTttcc | ACGUUUGA | m8a | Created | HHHSE_19459_TNRC6B|NM_015088|exon_utr3|-7.03324740999302|-0.20220128305588 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr22:g.40322901A>G | COSM1230026 | 587220 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-136-3p | actGATGATGaagtc | CAUCAUCG | m7a | Disrupted | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-412-3p | actgatGGTGAAGTc | ACUUCACC | m8a | Created | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-6754-3p | actgatGGTGAAGtc | UCUUCACC | m7b | Created | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-136-3p | actGATGATGaagtc | CAUCAUCG | m7a | Disrupted | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-412-3p | actgatGGTGAAGTc | ACUUCACC | m8a | Created | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-6754-3p | actgatGGTGAAGtc | UCUUCACC | m7b | Created | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr22:g.40322879C>T | COSM4498174 | CSCC-31-T | [skin][head_neck][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1193 | tACCATCCttgctga | GGGAUGGU | m7b | Disrupted | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-2392 | taCCATCCTtgctga | UAGGAUGG | m7b | (m7b->m6b) | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-4426 | taCCATCTTtgctga | GAAGAUGG | m7b | (m6b->m7b) | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-4647 | taCCATCTTtgctga | GAAGAUGG | m7b | (m6b->m7b) | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-4662b | taCCATCTTTgctga | AAAGAUGG | m8a | Created | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-545-3p | taccatcTTTGCTGa | UCAGCAAA | m7b | Created | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-1193 | tACCATCCttgctga | GGGAUGGU | m7b | Disrupted | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-2392 | taCCATCCTtgctga | UAGGAUGG | m7b | (m7b->m6b) | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-4426 | taCCATCTTtgctga | GAAGAUGG | m7b | (m6b->m7b) | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-4647 | taCCATCTTtgctga | GAAGAUGG | m7b | (m6b->m7b) | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-4662b | taCCATCTTTgctga | AAAGAUGG | m8a | Created | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |
hsa-miR-545-3p | taccatcTTTGCTGa | UCAGCAAA | m7b | Created | HHHSE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893 |