SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001024843
Gene Symbol: TNRC6B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.40334178C>T COSN8010738 PCSI_0083_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2467-3p atCTCTGCacttctt AGCAGAGG m6b Disrupted HHHNE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058
hsa-miR-3678-3p atCTCTGCActtctt CUGCAGAG m7b (m7b->m6b) HHHNE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058
hsa-miR-3919 aTCTCTGCacttctt GCAGAGAA m7a Disrupted HHHNE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058
hsa-miR-4797-5p atCTCTGTacttctt GACAGAGU m6b Created HHHNE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058
hsa-miR-519a-3p atctcTGCACTTctt AAAGUGCA m7b Disrupted HHHNE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058
hsa-miR-519b-3p atctcTGCACTTctt AAAGUGCA m7b Disrupted HHHNE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058
hsa-miR-519c-3p atctcTGCACTTctt AAAGUGCA m7b Disrupted HHHNE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058
hsa-miR-5585-5p atctctGTACTTCtt UGAAGUAC m7b Created HHHNE_19475_TNRC6B|NM_015088|exon_utr3|-6.83297829769617|-0.740506716819058

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40325390C>G COSN8018996 8034061 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3154 agCCCTTCTGgctta CAGAAGGG m8a Disrupted HHHNE_19463_TNRC6B|NM_015088|exon_utr3|-6.93098185292128|-0.260334117698561
hsa-miR-4457 agcCCTTGTGgctta UCACAAGG m7b Created HHHNE_19463_TNRC6B|NM_015088|exon_utr3|-6.93098185292128|-0.260334117698561
hsa-miR-449b-3p agccctTGTGGCTta CAGCCACA m7b Created HHHNE_19463_TNRC6B|NM_015088|exon_utr3|-6.93098185292128|-0.260334117698561

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40324701G>A COSN8612740 4000_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4635 aCTTCAAGcgtttcc UCUUGAAG m7b Disrupted HHHNE_19459_TNRC6B|NM_015088|exon_utr3|-7.03324740999302|-0.20220128305588
hsa-miR-5707 actTCAAACGTttcc ACGUUUGA m8a Created HHHNE_19459_TNRC6B|NM_015088|exon_utr3|-7.03324740999302|-0.20220128305588

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40322901A>G COSM1230026 587220 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-136-3p actGATGATGaagtc CAUCAUCG m7a Disrupted HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-412-3p actgatGGTGAAGTc ACUUCACC m8a Created HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-6754-3p actgatGGTGAAGtc UCUUCACC m7b Created HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-136-3p actGATGATGaagtc CAUCAUCG m7a Disrupted HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-412-3p actgatGGTGAAGTc ACUUCACC m8a Created HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-6754-3p actgatGGTGAAGtc UCUUCACC m7b Created HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40322879C>T COSM4498174 CSCC-31-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2392 taCCATCCTtgctga UAGGAUGG m7b (m7b->m6b) HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-4426 taCCATCTTtgctga GAAGAUGG m7b (m6b->m7b) HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-4647 taCCATCTTtgctga GAAGAUGG m7b (m6b->m7b) HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-4662b taCCATCTTTgctga AAAGAUGG m8a Created HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-545-3p taccatcTTTGCTGa UCAGCAAA m7b Created HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-1193 tACCATCCttgctga GGGAUGGU m7b Disrupted HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-2392 taCCATCCTtgctga UAGGAUGG m7b (m7b->m6b) HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-4426 taCCATCTTtgctga GAAGAUGG m7b (m6b->m7b) HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-4647 taCCATCTTtgctga GAAGAUGG m7b (m6b->m7b) HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-4662b taCCATCTTTgctga AAAGAUGG m8a Created HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893
hsa-miR-545-3p taccatcTTTGCTGa UCAGCAAA m7b Created HHHNE_19452_TNRC6B|NM_015088|exon_CDS|-7.37231230741589|-1.33092687434893

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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