SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001024688
Gene Symbol: NBN
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr8:g.89935439A>G COSN1369560 BN28T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7157-3p atGCACAGAactttg UCUGUGCU m7a (m6a->m7a) HPKTA_60322_G65243.1_90947677
hsa-miR-6889-3p atGCACAGAactttg UCUGUGCC m7a (m6a->m7a) HPKTA_60322_G65243.1_90947677
hsa-miR-6874-3p atgcaCAGAACTttg CAGUUCUG m7b Created HPKTA_60322_G65243.1_90947677
hsa-miR-6737-3p atGCACAGAactttg UCUGUGCU m7a (m6a->m7a) HPKTA_60322_G65243.1_90947677
hsa-miR-561-3p atgcacaAAACTTTg CAAAGUUU m7b Disrupted HPKTA_60322_G65243.1_90947677
hsa-miR-5008-3p atGCACAGaactttg CCUGUGCU m6b Created HPKTA_60322_G65243.1_90947677
hsa-miR-148a-5p atgcacAGAACTTTg AAAGUUCU m8a Created HPKTA_60322_G65243.1_90947677
hsa-miR-2113 atGCACAAAactttg AUUUGUGC m7b (m7b->m6b) HPKTA_60322_G65243.1_90947677
hsa-miR-148b-5p atgcaCAGAACTTtg AAGUUCUG m8a Created HPKTA_60322_G65243.1_90947677

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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