SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001024680
Gene Symbol: FBXO48

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.68465015TTT>T COSM1683852 A549 [lung][NS][carcinoma][bronchioloalveolar_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548ah-5p aaaTCACTTTTaaaatt AAAAGUGA m8a Disrupted HPKMA_8716_G10089.1_68692155
hsa-miR-548az-5p aaatCACTTTTaaaatt CAAAAGUG m7b Disrupted HPKMA_8716_G10089.1_68692155
hsa-miR-548n aaatcACTTTTaaaatt CAAAAGUA m6b Disrupted HPKMA_8716_G10089.1_68692155
hsa-miR-548t-5p aaatCACTTTTaaaatt CAAAAGUG m7b Disrupted HPKMA_8716_G10089.1_68692155
hsa-miR-7856-5p aaatcaCTTAAAAtt UUUUAAGG m7a Created HPKMA_8716_G10089.1_68692155
hsa-miR-8062 aAATCACTtttaaaatt CAGUGAUU m7b Disrupted HPKMA_8716_G10089.1_68692155
hsa-miR-3609 aaaTCACTTTtaaaatt CAAAGUGA m7b Disrupted HPKMA_8716_G10089.1_68692155
hsa-miR-106a-5p aaatCACTTTTaaaatt AAAAGUGC m7a Disrupted HPKMA_8716_G10089.1_68692155

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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