SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001024593
Gene Symbol: MSS51

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.73424731T>C COSM1963729 ESCC-139T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-671-3p gtgGAACCGGAtaca UCCGGUUC m8a Created HPRT3_4226_G5534.1_75184479
hsa-miR-6070 gtGGAACCGGataca CCGGUUCC m8a Created HPRT3_4226_G5534.1_75184479
hsa-miR-584-3p gtGGAACTGgataca UCAGUUCC m7b (m7b->m6b) HPRT3_4226_G5534.1_75184479
hsa-miR-5195-3p gtggAACTGGATaca AUCCAGUU m8a Disrupted HPRT3_4226_G5534.1_75184479
hsa-miR-145-5p gtggAACTGGAtaca GUCCAGUU m7b Disrupted HPRT3_4226_G5534.1_75184479
hsa-miR-3713 gtggaacCGGATACa GGUAUCCG m7b Created HPRT3_4226_G5534.1_75184479

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser