SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001024380
Gene Symbol: TM2D2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.38991357G>A COSM1456998 TCGA-D5-6930-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-215-3p agtgATGACAGcaac UCUGUCAU m7b Created HPKMA_14316_G16566.1_38848865
hsa-miR-4769-3p agtgATGGCAGcaac UCUGCCAU m7b Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-626 agtgatGACAGCaac AGCUGUCU m6b Created HPKMA_14316_G16566.1_38848865
hsa-miR-6817-5p agtgATGGCAGcaac UCUGCCAU m7b Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-6876-3p agtgatGACAGCaac AGCUGUCU m6b Created HPKMA_14316_G16566.1_38848865
hsa-miR-6882-3p agtgatGGCAGCAac UGCUGCCU m7a Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-6884-3p aGTGATGGcagcaac CCCAUCAC m7b Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-215-3p agtgATGACAGcaac UCUGUCAU m7b Created HPKMA_14316_G16566.1_38848865
hsa-miR-4769-3p agtgATGGCAGcaac UCUGCCAU m7b Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-626 agtgatGACAGCaac AGCUGUCU m6b Created HPKMA_14316_G16566.1_38848865
hsa-miR-6817-5p agtgATGGCAGcaac UCUGCCAU m7b Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-6876-3p agtgatGACAGCaac AGCUGUCU m6b Created HPKMA_14316_G16566.1_38848865
hsa-miR-6882-3p agtgatGGCAGCAac UGCUGCCU m7a Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-6884-3p aGTGATGGcagcaac CCCAUCAC m7b Disrupted HPKMA_14316_G16566.1_38848865

Mutation Mutation ID Sample Name Cancer Type
chr8:g.38991356C>A COSM4734040 T2931 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2115-5p gtgaTGGAAGCaact AGCUUCCA m7b Created HPKMA_14316_G16566.1_38848865
hsa-miR-3977 gtgatgGAAGCAact GUGCUUCA m6b Created HPKMA_14316_G16566.1_38848865
hsa-miR-4769-3p gtgATGGCAGcaact UCUGCCAU m7b Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-516a-3p gtgatGGAAGCAact UGCUUCCU m7a Created HPKMA_14316_G16566.1_38848865
hsa-miR-516b-3p gtgatGGAAGCAact UGCUUCCU m7a Created HPKMA_14316_G16566.1_38848865
hsa-miR-6817-5p gtgATGGCAGcaact UCUGCCAU m7b Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-6882-3p gtgatGGCAGCAact UGCUGCCU m7a Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-7162-5p gtgatGGAAGCAact UGCUUCCU m7a Created HPKMA_14316_G16566.1_38848865
hsa-miR-2115-5p gtgaTGGAAGCaact AGCUUCCA m7b Created HPKMA_14316_G16566.1_38848865
hsa-miR-3977 gtgatgGAAGCAact GUGCUUCA m6b Created HPKMA_14316_G16566.1_38848865
hsa-miR-4769-3p gtgATGGCAGcaact UCUGCCAU m7b Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-516a-3p gtgatGGAAGCAact UGCUUCCU m7a Created HPKMA_14316_G16566.1_38848865
hsa-miR-516b-3p gtgatGGAAGCAact UGCUUCCU m7a Created HPKMA_14316_G16566.1_38848865
hsa-miR-6817-5p gtgATGGCAGcaact UCUGCCAU m7b Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-6882-3p gtgatGGCAGCAact UGCUGCCU m7a Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-7162-5p gtgatGGAAGCAact UGCUUCCU m7a Created HPKMA_14316_G16566.1_38848865

Mutation Mutation ID Sample Name Cancer Type
chr8:g.38991343A>G COSM1496905 TCGA-B0-5098-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148a-3p ctggTGCACTGttta UCAGUGCA m7b Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-148b-3p ctggTGCACTGttta UCAGUGCA m7b Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-152-3p ctggTGCACTGttta UCAGUGCA m7b Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-148a-3p ctggTGCACTGttta UCAGUGCA m7b Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-148b-3p ctggTGCACTGttta UCAGUGCA m7b Disrupted HPKMA_14316_G16566.1_38848865
hsa-miR-152-3p ctggTGCACTGttta UCAGUGCA m7b Disrupted HPKMA_14316_G16566.1_38848865

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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