SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001023563
Gene Symbol: ZNF805

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.57253883G>T COSM4799079 BCM337T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-190a-5p aaacACATATCAtac UGAUAUGU m8a Created HPTA3_9627_G15150.1_57765250
hsa-miR-190b aaacACATATCAtac UGAUAUGU m8a Created HPTA3_9627_G15150.1_57765250
hsa-miR-511-3p aaACACATatcatac AAUGUGUA m6b Created HPTA3_9627_G15150.1_57765250

Mutation Mutation ID Sample Name Cancer Type
chr19:g.57253882A>T COSM475368 TCGA-B0-5119-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-383-5p caaacaCTGATCata AGAUCAGA m6b Created HPTA3_9627_G15150.1_57765250
hsa-miR-4255 caAACACTGatcata CAGUGUUC m7a (m6a->m7a) HPTA3_9627_G15150.1_57765250
hsa-miR-4302 caaACACTGatcata CCAGUGUG m6b Created HPTA3_9627_G15150.1_57765250
hsa-miR-5094 caaaCACTGATcata AAUCAGUG m7b Created HPTA3_9627_G15150.1_57765250

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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