SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001018067
Gene Symbol: SERBP1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.67413052T>AT COSN505710
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6853-3p ttaaaAATGAACttc UGUUCAUU m7b Disrupted HPKTA_4729_G5044.1_67878735
hsa-miR-1250-3p ttaAAAATGaacttc ACAUUUUC m6b Disrupted HPKTA_4729_G5044.1_67878735
hsa-miR-153-5p ttAAAAATGAacttc UCAUUUUU m8a Disrupted HPKTA_4729_G5044.1_67878735
hsa-miR-5696 ttaaAAATGAacttc CUCAUUUA m6b Disrupted HPKTA_4729_G5044.1_67878735

Mutation Mutation ID Sample Name Cancer Type
chr1:g.67412779T>A COSN10052130 C0065T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548ay-3p atactGGTTTTaata CAAAACCG m6b Disrupted HPKTA_4726_G5041.1_67878448
hsa-miR-548at-3p atactGGTTTTaata CAAAACCG m6b Disrupted HPKTA_4726_G5041.1_67878448
hsa-miR-548t-3p atacTGGTTTTaata AAAAACCA m7b Disrupted HPKTA_4726_G5041.1_67878448
hsa-miR-605-5p atactGGATTTAata UAAAUCCC m7a Created HPKTA_4726_G5041.1_67878448
hsa-miR-548as-3p atactGGTTTTAata UAAAACCC m7a Disrupted HPKTA_4726_G5041.1_67878448
hsa-miR-548aa atacTGGTTTTaata AAAAACCA m7b Disrupted HPKTA_4726_G5041.1_67878448
hsa-miR-548ap-3p atacTGGTTTTaata AAAAACCA m7b Disrupted HPKTA_4726_G5041.1_67878448

Mutation Mutation ID Sample Name Cancer Type
chr1:g.67408871A>T COSN4751526 tumor_4102009 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1277-5p ctATATATTcaaagt AAAUAUAU m7b (m6b->m7b) HPKTA_4713_G5029.1_67874556
hsa-miR-5585-3p ctataTATTCAaagt CUGAAUAG m6b Created HPKTA_4713_G5029.1_67874556
hsa-miR-5011-5p cTATATATtcaaagt UAUAUAUA m7b Created HPKTA_4713_G5029.1_67874556

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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