SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001018067
Gene Symbol: SERBP1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.67413052T>AT COSN505710
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6853-3p ttaaaAATGAACttc UGUUCAUU m7b Disrupted HHHNA_1153_SERBP1|NM_001018067|exon_utr3|-7.10479038878576|0.0339225903200379
hsa-miR-1250-3p ttaAAAATGaacttc ACAUUUUC m6b Disrupted HHHNA_1153_SERBP1|NM_001018067|exon_utr3|-7.10479038878576|0.0339225903200379
hsa-miR-153-5p ttAAAAATGAacttc UCAUUUUU m8a Disrupted HHHNA_1153_SERBP1|NM_001018067|exon_utr3|-7.10479038878576|0.0339225903200379
hsa-miR-5696 ttaaAAATGAacttc CUCAUUUA m6b Disrupted HHHNA_1153_SERBP1|NM_001018067|exon_utr3|-7.10479038878576|0.0339225903200379

Mutation Mutation ID Sample Name Cancer Type
chr1:g.67408391A>G COSN1452776 RK092_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-499b-3p aatcaGTGATGTTtg AACAUCAC m8a Created HHHNA_1151_SERBP1|NM_001018067|exon_utr3|-7.0609582410981|1.98518333967906
hsa-miR-499a-3p aatcaGTGATGTTtg AACAUCAC m8a Created HHHNA_1151_SERBP1|NM_001018067|exon_utr3|-7.0609582410981|1.98518333967906
hsa-miR-4420 aaTCAGTGAtgtttg GUCACUGA m7b (m6b->m7b) HHHNA_1151_SERBP1|NM_001018067|exon_utr3|-7.0609582410981|1.98518333967906
hsa-miR-323a-3p aatcaGTAATGTttg CACAUUAC m7b Disrupted HHHNA_1151_SERBP1|NM_001018067|exon_utr3|-7.0609582410981|1.98518333967906
hsa-miR-181b-3p aaTCAGTGAtgtttg CUCACUGA m7b (m6b->m7b) HHHNA_1151_SERBP1|NM_001018067|exon_utr3|-7.0609582410981|1.98518333967906
hsa-miR-181b-2-3p aaTCAGTGAtgtttg CUCACUGA m7b (m6b->m7b) HHHNA_1151_SERBP1|NM_001018067|exon_utr3|-7.0609582410981|1.98518333967906

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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