SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001018054
Gene Symbol: LRP8

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.53245657A>C COSN6038701 RK128_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-617 aaaattGAAGTCata AGACUUCC m6b Disrupted HHSJI_98_Peak284|11|0.1366|4||LRP8

Mutation Mutation ID Sample Name Cancer Type
chr1:g.53245550C>T COSN8141690 PCSI_0083_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1295b-5p aaaacTCTGGGTata CACCCAGA m7b Created HHSJI_98_Peak284|11|0.1366|4||LRP8
hsa-miR-1912 aaaacTCTGGGTAta UACCCAGA m8a Created HHSJI_98_Peak284|11|0.1366|4||LRP8
hsa-miR-4482-5p aaaactCTGGGTata AACCCAGU m6b Created HHSJI_98_Peak284|11|0.1366|4||LRP8
hsa-miR-5591-3p aaaactcTGGGTATa AUACCCAU m7a Created HHSJI_98_Peak284|11|0.1366|4||LRP8
hsa-miR-941 aaaactCCGGGTata CACCCGGC m6b Disrupted HHSJI_98_Peak284|11|0.1366|4||LRP8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser