SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001018054
Gene Symbol: LRP8

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.53327839A>G COSM4144084 PTC-28C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-505-5p ctgctgcGGCTCCag GGGAGCCA m6b Created HHHNA_1053_LRP8|NM_017522|exon_CDS|-6.34999356329676|-0.873532233214506
hsa-miR-558 ctgctGCAGCTCcag UGAGCUGC m7b Disrupted HHHNA_1053_LRP8|NM_017522|exon_CDS|-6.34999356329676|-0.873532233214506
hsa-miR-6500-5p ctgctgcAGCTCCag AGGAGCUA m6b Disrupted HHHNA_1053_LRP8|NM_017522|exon_CDS|-6.34999356329676|-0.873532233214506
hsa-miR-6874-5p ctgctgcAGCTCCAg AUGGAGCU m7b Disrupted HHHNA_1053_LRP8|NM_017522|exon_CDS|-6.34999356329676|-0.873532233214506
hsa-miR-1184 ctGCTGCAGctccag CCUGCAGC m7b (m7b->m6b) HHHNA_1053_LRP8|NM_017522|exon_CDS|-6.34999356329676|-0.873532233214506
hsa-miR-4633-3p ctgctgcAGCTCCag AGGAGCUA m6b Disrupted HHHNA_1053_LRP8|NM_017522|exon_CDS|-6.34999356329676|-0.873532233214506

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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