SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001017969
Gene Symbol: KIAA2026

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.5922230TG>G COSM4449907 CSCC-20-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1468-3p actgTTTTGCacaaca AGCAAAAU m6b Disrupted HPSD3_10321_G13998.1_5922235
hsa-miR-19a-3p actgtTTTGCACAaca UGUGCAAA m8a Disrupted HPSD3_10321_G13998.1_5922235
hsa-miR-19b-3p actgtTTTGCACAaca UGUGCAAA m8a Disrupted HPSD3_10321_G13998.1_5922235
hsa-miR-548aw actgTTTTGCACaaca GUGCAAAA m8a Disrupted HPSD3_10321_G13998.1_5922235
hsa-miR-1468-3p actgTTTTGCacaaca AGCAAAAU m6b Disrupted HPSD3_10321_G13998.1_5922235
hsa-miR-19a-3p actgtTTTGCACAaca UGUGCAAA m8a Disrupted HPSD3_10321_G13998.1_5922235
hsa-miR-19b-3p actgtTTTGCACAaca UGUGCAAA m8a Disrupted HPSD3_10321_G13998.1_5922235
hsa-miR-548aw actgTTTTGCACaaca GUGCAAAA m8a Disrupted HPSD3_10321_G13998.1_5922235

Mutation Mutation ID Sample Name Cancer Type
chr9:g.5920144T>G COSM3657691 TCGA-D3-A3MR-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4477b aatTCCTTAAgtggc AUUAAGGA m7b Disrupted HPSD3_10320_G13997.1_5920167
hsa-miR-651-3p aaTTCCTTaagtggc AAAGGAAA m6b Disrupted HPSD3_10320_G13997.1_5920167
hsa-miR-873-5p aaTTCCTGaagtggc GCAGGAAC m6b Created HPSD3_10320_G13997.1_5920167
hsa-miR-4477b aatTCCTTAAgtggc AUUAAGGA m7b Disrupted HPSD3_10320_G13997.1_5920167
hsa-miR-651-3p aaTTCCTTaagtggc AAAGGAAA m6b Disrupted HPSD3_10320_G13997.1_5920167
hsa-miR-873-5p aaTTCCTGaagtggc GCAGGAAC m6b Created HPSD3_10320_G13997.1_5920167

Mutation Mutation ID Sample Name Cancer Type
chr9:g.5919831G>T COSM3848626 TCGA-AC-A23H-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4272 ccattTTGAATacca CAUUCAAC m6b Disrupted HPSD3_10319_G13996.1_5919819
hsa-miR-4698 cCATTTTGAatacca UCAAAAUG m8a (m8a->m7a) HPSD3_10319_G13996.1_5919819
hsa-miR-548c-3p ccATTTTTaatacca CAAAAAUC m6b Created HPSD3_10319_G13996.1_5919819
hsa-miR-8063 ccATTTTGAatacca UCAAAAUC m7a (m7a->m6a) HPSD3_10319_G13996.1_5919819
hsa-miR-4272 ccattTTGAATacca CAUUCAAC m6b Disrupted HPSD3_10319_G13996.1_5919819
hsa-miR-4698 cCATTTTGAatacca UCAAAAUG m8a (m8a->m7a) HPSD3_10319_G13996.1_5919819
hsa-miR-548c-3p ccATTTTTaatacca CAAAAAUC m6b Created HPSD3_10319_G13996.1_5919819
hsa-miR-8063 ccATTTTGAatacca UCAAAAUC m7a (m7a->m6a) HPSD3_10319_G13996.1_5919819

Mutation Mutation ID Sample Name Cancer Type
chr9:g.5919814C>G COSM4163937 PTC-14C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3135b aataCTCCAGCatct GGCUGGAG m7b Disrupted HPSD3_10319_G13996.1_5919819
hsa-miR-3135b aataCTCCAGCatct GGCUGGAG m7b Disrupted HPSD3_10319_G13996.1_5919819

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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