SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001017956
Gene Symbol: OS9

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.57694235C>G COSM3812699 TCGA-AQ-A54O-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6743-3p agtctGAGCGGCggt AGCCGCUC m7b Created HHRBL_3701_BCBL1-2of3-SCL_8418
hsa-miR-6801-5p agTCTGACCggcggt UGGUCAGA m7b (m7b->m6b) HHRBL_3701_BCBL1-2of3-SCL_8418

Mutation Mutation ID Sample Name Cancer Type
chr12:g.57694218G>C COSM4147341 PTC-7C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4433a-3p gACTCCTGTtacccg ACAGGAGU m8a (m8a->m7a) HHRBL_3701_BCBL1-2of3-SCL_8418
hsa-miR-194-5p gactcCTGTTACccg UGUAACAG m7b Disrupted HHRBL_3701_BCBL1-2of3-SCL_8418
hsa-miR-3916 gacTCCTCTTacccg AAGAGGAA m7a Created HHRBL_3701_BCBL1-2of3-SCL_8418
hsa-miR-555 gactcctCTTACCCg AGGGUAAG m7b Created HHRBL_3701_BCBL1-2of3-SCL_8418

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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