SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001017423
Gene Symbol: ALDH18A1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.95625425C>A COSM921816 TCGA-D1-A103-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4709-5p ggctgatCTGTTGac ACAACAGU m6b Disrupted HHHNE_672_ALDH18A1|NM_001017423|exon_CDS|-7.05273510967757|-1.27062710952788
hsa-miR-421 ggctgatCTGTTGAc AUCAACAG m7b Disrupted HHHNE_672_ALDH18A1|NM_001017423|exon_CDS|-7.05273510967757|-1.27062710952788
hsa-miR-3074-3p ggCTGATATgttgac GAUAUCAG m7b (m6b->m7b) HHHNE_672_ALDH18A1|NM_001017423|exon_CDS|-7.05273510967757|-1.27062710952788
hsa-miR-1288-5p ggcTGATCTGttgac GCAGAUCA m7b Disrupted HHHNE_672_ALDH18A1|NM_001017423|exon_CDS|-7.05273510967757|-1.27062710952788

Mutation Mutation ID Sample Name Cancer Type
chr10:g.95625418C>T COSM4660992 T2944 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6884-3p ctgtTGATGGaccag CCCAUCAC m6b Created HHHNE_672_ALDH18A1|NM_001017423|exon_CDS|-7.05273510967757|-1.27062710952788
hsa-miR-505-3p cTGTTGACGgaccag CGUCAACA m8a (m8a->m7a) HHHNE_672_ALDH18A1|NM_001017423|exon_CDS|-7.05273510967757|-1.27062710952788
hsa-miR-421 CTGTTGATggaccag AUCAACAG m8a Created HHHNE_672_ALDH18A1|NM_001017423|exon_CDS|-7.05273510967757|-1.27062710952788

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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