SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001017415 |
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Gene Symbol: | USP1 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr1:g.62450957C>CT | COSM248232 | P04-1243 | [prostate][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-548i | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548am-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548ap-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548aq-5p | ctccTTACTTTgctat | GAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548ar-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548as-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548au-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548ay-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548b-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548bb-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548c-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548d-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548h-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548ak | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548j-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548o-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548w | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548y | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-559 | ctccTTACTTTgctat | UAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548ae-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-3973 | ctcctTACTTTGctat | ACAAAGUA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548a-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548ab | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
hsa-miR-548ad-5p | ctccTTACTTTgctat | AAAAGUAA | m7b | Created | HPRT3_460_G622.1_62916625 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.62450829G>A | COSM1240616 | ESO-859 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-297 | ttCATACATagtgca | AUGUAUGU | m7a | (m6a->m7a) | HPRT3_459_G621.1_62916501 |
hsa-miR-3924 | ttcATACATAgtgca | AUAUGUAU | m7b | Created | HPRT3_459_G621.1_62916501 |