SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001017415 |
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Gene Symbol: | USP1 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr1:g.62450504G>T | COSM426552 | TCGA-BH-A0C0-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-6758-3p | aaccattGAATGAGg | ACUCAUUC | m7b | Disrupted | HHHSE_20451_USP1|NM_001017415|exon_CDS|-7.18528831798391|1.85768850058952 |
hsa-miR-224-3p | aACCATTTaatgagg | AAAAUGGU | m7b | Created | HHHSE_20451_USP1|NM_001017415|exon_CDS|-7.18528831798391|1.85768850058952 |
hsa-miR-4272 | aaccaTTGAATGagg | CAUUCAAC | m7a | Disrupted | HHHSE_20451_USP1|NM_001017415|exon_CDS|-7.18528831798391|1.85768850058952 |
hsa-miR-4694-3p | aaCCATTTaatgagg | CAAAUGGA | m6b | Created | HHHSE_20451_USP1|NM_001017415|exon_CDS|-7.18528831798391|1.85768850058952 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr1:g.62450363G>A | COSM2238301 | TCGA-BR-8081-01 | [stomach][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.62450348C>G | COSM76963 | TCGA-13-0723-01 | [ovary][NS][carcinoma][serous_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4421 | acGACAGGTatggat | ACCUGUCU | m7a | (m6a->m7a) | HHHSE_20450_USP1|NM_001017415|exon_CDS|-6.63253030850381|-0.68421413122551 |
hsa-miR-626 | acGACAGCTatggat | AGCUGUCU | m7a | (m7a->m6a) | HHHSE_20450_USP1|NM_001017415|exon_CDS|-6.63253030850381|-0.68421413122551 |
hsa-miR-6876-3p | acGACAGCTatggat | AGCUGUCU | m7a | (m7a->m6a) | HHHSE_20450_USP1|NM_001017415|exon_CDS|-6.63253030850381|-0.68421413122551 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.62450346A>G | COSM1343786 | TCGA-AY-6196-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-626 | taacGACAGCTatgg | AGCUGUCU | m7a | Disrupted | HHHSE_20450_USP1|NM_001017415|exon_CDS|-6.63253030850381|-0.68421413122551 |
hsa-miR-6876-3p | taacGACAGCTatgg | AGCUGUCU | m7a | Disrupted | HHHSE_20450_USP1|NM_001017415|exon_CDS|-6.63253030850381|-0.68421413122551 |
hsa-miR-103b | taacgacGGCTATGg | UCAUAGCC | m7b | Created | HHHSE_20450_USP1|NM_001017415|exon_CDS|-6.63253030850381|-0.68421413122551 |