SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001015056
Gene Symbol: RTKN

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.74426003G>A COSN2525742
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-152-5p gaaaactAGAACCaa AGGUUCUG m6b Created HHHNA_13745_RTKN|NM_001015055|exon_utr3|-3.04357823924181|0.50788137900369
hsa-miR-182-3p gaaaacTAGAACCAa UGGUUCUA m8a Created HHHNA_13745_RTKN|NM_001015055|exon_utr3|-3.04357823924181|0.50788137900369
hsa-miR-218-1-3p gaaaactGGAACCAa AUGGUUCC m7b Disrupted HHHNA_13745_RTKN|NM_001015055|exon_utr3|-3.04357823924181|0.50788137900369
hsa-miR-4328 gAAAACTGGaaccaa CCAGUUUU m8a (m8a->m7a) HHHNA_13745_RTKN|NM_001015055|exon_utr3|-3.04357823924181|0.50788137900369
hsa-miR-145-5p gaaAACTGGAaccaa GUCCAGUU m7b Disrupted HHHNA_13745_RTKN|NM_001015055|exon_utr3|-3.04357823924181|0.50788137900369
hsa-miR-5195-3p gaaAACTGGAaccaa AUCCAGUU m7b Disrupted HHHNA_13745_RTKN|NM_001015055|exon_utr3|-3.04357823924181|0.50788137900369
hsa-miR-597-3p gaaaactAGAACCAa UGGUUCUC m7a Created HHHNA_13745_RTKN|NM_001015055|exon_utr3|-3.04357823924181|0.50788137900369
hsa-miR-152-5p gaaaactAGAACCaa AGGUUCUG m6b Created HHHNA_13745_RTKN|NM_001015055|exon_utr3|-3.04357823924181|0.50788137900369
hsa-miR-182-3p gaaaacTAGAACCAa UGGUUCUA m8a Created HHHNA_13745_RTKN|NM_001015055|exon_utr3|-3.04357823924181|0.50788137900369
hsa-miR-218-1-3p gaaaactGGAACCAa AUGGUUCC m7b Disrupted HHHNA_13745_RTKN|NM_001015055|exon_utr3|-3.04357823924181|0.50788137900369
hsa-miR-4328 gAAAACTGGaaccaa CCAGUUUU m8a (m8a->m7a) HHHNA_13745_RTKN|NM_001015055|exon_utr3|-3.04357823924181|0.50788137900369
hsa-miR-145-5p gaaAACTGGAaccaa GUCCAGUU m7b Disrupted HHHNA_13745_RTKN|NM_001015055|exon_utr3|-3.04357823924181|0.50788137900369
hsa-miR-5195-3p gaaAACTGGAaccaa AUCCAGUU m7b Disrupted HHHNA_13745_RTKN|NM_001015055|exon_utr3|-3.04357823924181|0.50788137900369
hsa-miR-597-3p gaaaactAGAACCAa UGGUUCUC m7a Created HHHNA_13745_RTKN|NM_001015055|exon_utr3|-3.04357823924181|0.50788137900369

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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