SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001014831
Gene Symbol: PAK4
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.39173014C>T COSM4950930 BCB109T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6886-5p ctcCCTGCGGagaga CCCGCAGG m7b Disrupted HHKTA_50266_NM_001014831|732|771|1.34130617260447|2.97656389319877

Mutation Mutation ID Sample Name Cancer Type
chr19:g.39173000G>A COSM4642307 LIM2405 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-504-3p gtgacaCACTCCaac GGGAGUGC m6b Created HHKTA_50266_NM_001014831|732|771|1.34130617260447|2.97656389319877
hsa-miR-574-5p gtgaCACACTCcaac UGAGUGUG m7b Created HHKTA_50266_NM_001014831|732|771|1.34130617260447|2.97656389319877
hsa-miR-6874-5p gtgacacGCTCCAac AUGGAGCU m6b Disrupted HHKTA_50266_NM_001014831|732|771|1.34130617260447|2.97656389319877
hsa-miR-122-5p gtgacACACTCCAac UGGAGUGU m8a Created HHKTA_50266_NM_001014831|732|771|1.34130617260447|2.97656389319877
hsa-miR-3198 gtgacacACTCCAac GUGGAGUC m6b Created HHKTA_50266_NM_001014831|732|771|1.34130617260447|2.97656389319877
hsa-miR-4309 gtgacacACTCCAac CUGGAGUC m6b Created HHKTA_50266_NM_001014831|732|771|1.34130617260447|2.97656389319877

Mutation Mutation ID Sample Name Cancer Type
chr19:g.39172983G>T COSM48633 16772 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4273 agtttGAGAACAtgt GUGUUCUC m7b Disrupted HHKTA_50266_NM_001014831|732|771|1.34130617260447|2.97656389319877
hsa-miR-616-5p agTTTGAGaacatgt ACUCAAAA m6b Disrupted HHKTA_50266_NM_001014831|732|771|1.34130617260447|2.97656389319877
hsa-miR-6715b-3p aGTTTGAGaacatgt CUCAAACC m7a Disrupted HHKTA_50266_NM_001014831|732|771|1.34130617260447|2.97656389319877
hsa-miR-7156-5p agtttGAGAACAtgt UUGUUCUC m7b Disrupted HHKTA_50266_NM_001014831|732|771|1.34130617260447|2.97656389319877

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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