SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001014445
Gene Symbol: NLE1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.35142074G>T COSM1520657 TCGA-44-7662-01 [lung][left_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4793-5p gttcCAGGATGaggg ACAUCCUG m7b Disrupted HHRBL_6291_BCBL1-2of3-SCL_10646
hsa-miR-6891-3p gttccagGATGAGGg CCCUCAUC m7b Disrupted HHRBL_6291_BCBL1-2of3-SCL_10646
hsa-miR-6870-3p gttccaGGATGAGgg GCUCAUCC m7b Disrupted HHRBL_6291_BCBL1-2of3-SCL_10646
hsa-miR-6128 gTTCCAGTatgaggg ACUGGAAU m7a Created HHRBL_6291_BCBL1-2of3-SCL_10646
hsa-miR-6072 gttccagGATGAGGg UCCUCAUC m7b Disrupted HHRBL_6291_BCBL1-2of3-SCL_10646
hsa-miR-1-5p gttccAGTATGaggg ACAUACUU m6b Created HHRBL_6291_BCBL1-2of3-SCL_10646

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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