SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001013843
Gene Symbol: SLTM

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.58879800A>G COSN6276918 RK077_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-425-5p tttgtGTGTCATTca AAUGACAC m8a Created HHKTA_6297_NM_024755|3392|3431|10.0814302650594|0.947707755620612
hsa-miR-642a-3p tttgTGTGTCattca AGACACAU m6b Created HHKTA_6297_NM_024755|3392|3431|10.0814302650594|0.947707755620612
hsa-miR-642b-3p tttgTGTGTCattca AGACACAU m6b Created HHKTA_6297_NM_024755|3392|3431|10.0814302650594|0.947707755620612
hsa-miR-8485 ttTGTGTGTcattca CACACACA m7b (m6b->m7b) HHKTA_6297_NM_024755|3392|3431|10.0814302650594|0.947707755620612

Mutation Mutation ID Sample Name Cancer Type
chr15:g.58879772G>A COSN8389712 tumor_4166706 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1250-5p cAGCACCGaggcaca ACGGUGCU m7b Disrupted HHKTA_6297_NM_024755|3392|3431|10.0814302650594|0.947707755620612
hsa-miR-4312 cagcacCAAGGCaca GGCCUUGU m6b Created HHKTA_6297_NM_024755|3392|3431|10.0814302650594|0.947707755620612

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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