SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001013735
Gene Symbol: FOXB2

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr9:g.77019864C>A COSM3908100 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15b-3p acgacTGATTCatca CGAAUCAU m6b Created HPTK7_7727_G11627.1_79634783
hsa-miR-4274 acGACTGCTtcatca CAGCAGUC m7b (m7b->m6b) HPTK7_7727_G11627.1_79634783
hsa-miR-15b-3p acgacTGATTCatca CGAAUCAU m6b Created HPTK7_7727_G11627.1_79634783
hsa-miR-4274 acGACTGCTtcatca CAGCAGUC m7b (m7b->m6b) HPTK7_7727_G11627.1_79634783
hsa-miR-15b-3p acgacTGATTCatca CGAAUCAU m6b Created HPTK7_7727_G11627.1_79634783
hsa-miR-4274 acGACTGCTtcatca CAGCAGUC m7b (m7b->m6b) HPTK7_7727_G11627.1_79634783

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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