SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001013699
Gene Symbol: H3F3C
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.31792048G>A COSM379002 LUAD-RT-S01702 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1245a cctcATCACTacagg AAGUGAUC m6b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-20b-3p cctcatcACTACAGg ACUGUAGU m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-3137 cctcatcGCTACAGg UCUGUAGC m7b Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-6073 cctcaTCACTACagg GGUAGUGA m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-8062 cctcATCACTacagg CAGUGAUU m6b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-8079 cctcATCACTacagg CAGUGAUC m6b Created HHRBL_3420_BCBL1-2of3-SCL_7444

Mutation Mutation ID Sample Name Cancer Type
chr12:g.31792038T>C COSM693342 TCGA-66-2793-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-3p acaggCCCGGGaccg CCCCGGGA m6b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-1915-3p acaggCCTGGGaccg CCCCAGGG m6b Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-2861 aCAGGCCCgggaccg GGGGCCUG m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-4281 acaggccCGGGACCg GGGUCCCG m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-4449 acaggcCCGGGACcg CGUCCCGG m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-4532 acaggCCCGGGaccg CCCCGGGG m6b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-4650-5p acAGGCCTGggaccg UCAGGCCU m7b (m7b->m6b) HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-4726-3p acaggCCTGGGaccg ACCCAGGU m6b Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-6735-3p ACAGGCCTgggaccg AGGCCUGU m8a Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-6749-5p acAGGCCCGggaccg UCGGGCCU m7b (m6b->m7b) HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-6840-3p acaggCCTGGGaccg GCCCAGGA m6b Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444

Mutation Mutation ID Sample Name Cancer Type
chr12:g.31792032C>T COSM3384300 8016470 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4746-5p ctGGGACCGtggcgc CCGGUCCC m7b (m7b->m6b) HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-5588-3p cTGGGACTgtggcgc AAGUCCCA m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444

Mutation Mutation ID Sample Name Cancer Type
chr12:g.31792027C>T COSM4689427 T3104 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29a-3p accgTGGTGCTtcga UAGCACCA m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-29b-3p accgTGGTGCTtcga UAGCACCA m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-29c-3p accgTGGTGCTtcga UAGCACCA m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-7706 accgtgGCGCTTCga UGAAGCGC m7b Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444

Mutation Mutation ID Sample Name Cancer Type
chr12:g.31792027C>A COSM401334 LUAD-5V8LT [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3928-5p accgtgGAGCTTCga UGAAGCUC m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-6806-3p accgtgGAGCTTCga UGAAGCUC m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-7706 accgtgGCGCTTCga UGAAGCGC m7b Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444

Mutation Mutation ID Sample Name Cancer Type
chr12:g.31792022C>T COSM1178149 TCGA-FS-A1ZA-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-330-3p ggcGCTTTGagagat GCAAAGCA m6b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-371a-5p ggcgcTTTGAGagat ACUCAAAC m6b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-371b-5p ggcgcTTTGAGagat ACUCAAAA m6b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-372-5p ggcgcTTTGAGagat CCUCAAAU m6b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-373-5p ggcgcTTTGAGagat ACUCAAAA m6b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-518a-3p gGCGCTTTgagagat GAAAGCGC m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-518b gGCGCTTTGagagat CAAAGCGC m8a (m7a->m8a) HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-518c-3p gGCGCTTTGagagat CAAAGCGC m8a (m7a->m8a) HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-518d-3p gGCGCTTTGagagat CAAAGCGC m8a (m7a->m8a) HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-518f-3p gGCGCTTTgagagat GAAAGCGC m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-616-5p ggcgcTTTGAGagat ACUCAAAA m6b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-7706 gGCGCTTCgagagat UGAAGCGC m7b Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444

Mutation Mutation ID Sample Name Cancer Type
chr12:g.31792013C>T COSM938767 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-216b-5p AGAGATTTgtcgtta AAAUCUCU m8a Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-4762-5p agAGATTTGtcgtta CCAAAUCU m7b (m6b->m7b) HHRBL_3420_BCBL1-2of3-SCL_7444

Mutation Mutation ID Sample Name Cancer Type
chr12:g.31791998T>A COSM358677 LUAD-CHTN-MAD06-00668 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-412-5p tcagaaGTCGACCga UGGUCGAC m7b Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-6505-3p tcAGAAGTCgaccga UGACUUCU m7b (m7b->m6b) HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-6740-3p tcAGAAGACgaccga UGUCUUCU m7b (m6b->m7b) HHRBL_3420_BCBL1-2of3-SCL_7444

Mutation Mutation ID Sample Name Cancer Type
chr12:g.31791993C>T COSM468274 TCGA-BP-5168-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-412-5p aGTCGACCgagctgc UGGUCGAC m7b Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-423-3p agtcgACCGAGCTgc AGCUCGGU m8a Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-4264 agtcGACTGAGctgc ACUCAGUC m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-6854-5p agtcgaCTGAGCTgc AAGCUCAG m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
Mutation Mutation ID Sample Name Cancer Type
chr12:g.31791978G>A COSM3460180 TCGA-EE-A2MG-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr12:g.31791969C>A COSM365648 LUAD-F00121 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3202 agctgCCCTTCCAga UGGAAGGG m8a Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-4436b-3p agCTGCCCTtccaga CAGGGCAG m7b (m7b->m6b) HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-4632-5p agCTGCCCTtccaga GAGGGCAG m7b (m7b->m6b) HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-5197-5p agcTGCCATTccaga CAAUGGCA m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-6128 agctgccATTCCAGa ACUGGAAU m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-613 agctgcCATTCCaga AGGAAUGU m6b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-6735-5p agCTGCCCTtccaga CAGGGCAG m7b (m7b->m6b) HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-6879-5p agCTGCCCTtccaga CAGGGCAG m7b (m7b->m6b) HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-7843-5p agCTGCCCTtccaga GAGGGCAG m7b (m7b->m6b) HHRBL_3420_BCBL1-2of3-SCL_7444

Mutation Mutation ID Sample Name Cancer Type
chr12:g.31791950G>A COSM3460179 TCGA-D3-A2J8-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1238-3p ggtGAGGAAGatcgc CUUCCUCG m7a Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-141-5p ggtgaGGAAGATcgc CAUCUUCC m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-4469 ggtGAGGGAGatcgc GCUCCCUC m7b Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-670-3p ggTGAGGAAgatcgc UUUCCUCA m7b (m6b->m7b) HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-6867-3p ggtgAGGGAGAtcgc CUCUCCCU m7b Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-7113-3p ggtgAGGGAGatcgc CCUCCCUG m6b Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444

Mutation Mutation ID Sample Name Cancer Type
chr12:g.31791945C>T COSM3460178 TCGA-D3-A2J7-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7i-3p gggagaTTGCGCAGg CUGCGCAA m8a Created HHRBL_3420_BCBL1-2of3-SCL_7444

Mutation Mutation ID Sample Name Cancer Type
chr12:g.31791944G>A COSM3398668 TCGA-06-5856-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1539 ggagatcGCGCAGGa UCCUGCGC m7b Disrupted HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-3193 ggagatcACGCAGGa UCCUGCGU m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-4520-5p ggagatCACGCAGGa CCUGCGUG m8a Created HHRBL_3420_BCBL1-2of3-SCL_7444
hsa-miR-7641 gGAGATCAcgcagga UUGAUCUC m7b Created HHRBL_3420_BCBL1-2of3-SCL_7444

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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