SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001013438
Gene Symbol: FXR1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.180977139A>C COSN8488763 J88_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-17-5p gtaaataCACTTTGa CAAAGUGC m7a Created HHKTA_18677_NM_001013439|3062|3101|3.89411469465814|1.35631117002948
hsa-miR-20b-5p gtaaataCACTTTGa CAAAGUGC m7a Created HHKTA_18677_NM_001013439|3062|3101|3.89411469465814|1.35631117002948
hsa-miR-223-5p gtaAATACACtttga CGUGUAUU m7b Created HHKTA_18677_NM_001013439|3062|3101|3.89411469465814|1.35631117002948
hsa-miR-3609 gtaaataCACTTTGa CAAAGUGA m7a Created HHKTA_18677_NM_001013439|3062|3101|3.89411469465814|1.35631117002948
hsa-miR-519d-3p gtaaataCACTTTGa CAAAGUGC m7a Created HHKTA_18677_NM_001013439|3062|3101|3.89411469465814|1.35631117002948
hsa-miR-520g-3p gtaaataCACTTTGa ACAAAGUG m7b Created HHKTA_18677_NM_001013439|3062|3101|3.89411469465814|1.35631117002948
hsa-miR-520h gtaaataCACTTTGa ACAAAGUG m7b Created HHKTA_18677_NM_001013439|3062|3101|3.89411469465814|1.35631117002948
hsa-miR-561-3p gtaaatAAACTTTGa CAAAGUUU m8a Disrupted HHKTA_18677_NM_001013439|3062|3101|3.89411469465814|1.35631117002948
hsa-miR-93-5p gtaaataCACTTTGa CAAAGUGC m7a Created HHKTA_18677_NM_001013439|3062|3101|3.89411469465814|1.35631117002948

Mutation Mutation ID Sample Name Cancer Type
chr3:g.180976189G>C COSM332014 LUAD-B00523 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-298 gCTTCTGCcgatgac AGCAGAAG m7b Created HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948
hsa-miR-6785-3p gcttctGGCGATGac ACAUCGCC m7b Disrupted HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948

Mutation Mutation ID Sample Name Cancer Type
chr3:g.180976171G>A COSM1207675 TCGA-G4-6586-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3147 ataaacgGCCCAACt GGUUGGGC m7b Disrupted HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948
hsa-miR-6724-5p ataaacGGCCCAact CUGGGCCC m6b Disrupted HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948
hsa-miR-6781-5p ataaaCGGCCCaact CGGGCCGG m6b Disrupted HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948
hsa-miR-6877-5p ataaaCGGCCCaact AGGGCCGA m6b Disrupted HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948

Mutation Mutation ID Sample Name Cancer Type
chr3:g.180976169C>T COSM1308860 TCGA-BT-A20R-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4640-5p caataaaTGGCCCAa UGGGCCAG m7a Created HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948
hsa-miR-4726-5p caataaaTGGCCCaa AGGGCCAG m6b Created HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948
hsa-miR-4729 caATAAATGgcccaa UCAUUUAU m7b (m6b->m7b) HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948
hsa-miR-6508-3p caataaATGGCCCAa UGGGCCAU m8a Created HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948
hsa-miR-6781-5p caataaaCGGCCCaa CGGGCCGG m6b Disrupted HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948
hsa-miR-6877-5p caataaaCGGCCCaa AGGGCCGA m6b Disrupted HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948

Mutation Mutation ID Sample Name Cancer Type
chr3:g.180976155G>A COSM4972232 2328682 [thyroid][NS][carcinoma][Hurthle_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4762-3p tcctTCAGAAaaggc CUUCUGAU m6b Disrupted HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948
hsa-miR-627-3p tccttcAGAAAAGgc UCUUUUCU m7b Disrupted HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948
hsa-miR-6864-5p tCCTTCAAaaaaggc UUGAAGGG m7a Created HHKTA_49946_NM_001013439|2094|2133|1.38457411365623|1.35631117002948
Mutation Mutation ID Sample Name Cancer Type
chr3:g.180912723G>T COSM729710 TCGA-66-2759-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.180912714G>T COSM357352 LUAD-CHTN-3090415 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1303 gttcgcgTCTCTAAc UUUAGAGA m7b Created HHKTA_48894_NM_001013439|28|67|1.42784205470798|1.35631117002948
Mutation Mutation ID Sample Name Cancer Type
chr3:g.180912712C>T COSM3945186 J1_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr3:g.180912704G>T COSM137392 cSCCP2 [skin][hand][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr3:g.180912701G>T COSM345465 LUAD-S01315 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.180912698A>G COSM3767318 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6736-3p GGAGCTGAcggtgga UCAGCUCC m8a Disrupted HHKTA_48894_NM_001013439|28|67|1.42784205470798|1.35631117002948

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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