SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001013438
Gene Symbol: FXR1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.180914914G>A COSN191225 PD3890a [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-140-3p ggaaaCTGTGGTctt UACCACAG m7b Disrupted HHHNE_6777_FXR1|NM_001013439|exon_utr5|-7.10665953042199|-2.18774086159095
hsa-miR-6502-3p ggaaactATGGTCTt UAGACCAU m7b Created HHHNE_6777_FXR1|NM_001013439|exon_utr5|-7.10665953042199|-2.18774086159095

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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