SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

Transcript ID:	NM_001013438
Gene Symbol:	FXR1

Somatic mutations that impact miRNA target sites

Mutation		Mutation ID	Sample Name	Cancer Type
chr3:g.180977139A>C		COSN8488763	J88_T	[lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-520g-3p	gtaaataCACTTTGa	ACAAAGUG	m7b	Created	HHHNA_16956_FXR1|NM_001013438|exon_utr3|-6.04107876994294|2.32434172094694
hsa-miR-520h	gtaaataCACTTTGa	ACAAAGUG	m7b	Created	HHHNA_16956_FXR1|NM_001013438|exon_utr3|-6.04107876994294|2.32434172094694
hsa-miR-561-3p	gtaaatAAACTTTGa	CAAAGUUU	m8a	Disrupted	HHHNA_16956_FXR1|NM_001013438|exon_utr3|-6.04107876994294|2.32434172094694
hsa-miR-93-5p	gtaaataCACTTTGa	CAAAGUGC	m7a	Created	HHHNA_16956_FXR1|NM_001013438|exon_utr3|-6.04107876994294|2.32434172094694
hsa-miR-519d-3p	gtaaataCACTTTGa	CAAAGUGC	m7a	Created	HHHNA_16956_FXR1|NM_001013438|exon_utr3|-6.04107876994294|2.32434172094694
hsa-miR-3609	gtaaataCACTTTGa	CAAAGUGA	m7a	Created	HHHNA_16956_FXR1|NM_001013438|exon_utr3|-6.04107876994294|2.32434172094694
hsa-miR-223-5p	gtaAATACACtttga	CGUGUAUU	m7b	Created	HHHNA_16956_FXR1|NM_001013438|exon_utr3|-6.04107876994294|2.32434172094694
hsa-miR-20b-5p	gtaaataCACTTTGa	CAAAGUGC	m7a	Created	HHHNA_16956_FXR1|NM_001013438|exon_utr3|-6.04107876994294|2.32434172094694
hsa-miR-17-5p	gtaaataCACTTTGa	CAAAGUGC	m7a	Created	HHHNA_16956_FXR1|NM_001013438|exon_utr3|-6.04107876994294|2.32434172094694

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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