SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001013251
Gene Symbol: SLC3A2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888524C>T COSM3869773 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4691-3p ggcctctTGGCTGGa CCAGCCAC m7a Created HPTA3_3465_G5309.1_62655988

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888513T>C COSM2162018 T3080 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6729-3p ttGGGGATGtgggcc UCAUCCCC m7b (m7b->m6b) HPTA3_3465_G5309.1_62655988
hsa-miR-662 ttggggACGTGGGcc UCCCACGU m7b Created HPTA3_3465_G5309.1_62655988

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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