SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001013251
Gene Symbol: SLC3A2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888638G>C COSM689822 TCGA-22-4604-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-23a-5p ctGGAACCCCtgaaa GGGGUUCC m8a Created HHHNE_17101_SLC3A2|NM_001012664|exon_CDS|-5.50497193615448|-2.36342903434111
hsa-miR-23b-5p ctGGAACCCctgaaa UGGGUUCC m7b (m6b->m7b) HHHNE_17101_SLC3A2|NM_001012664|exon_CDS|-5.50497193615448|-2.36342903434111
hsa-miR-3127-5p ctggaacCCCTGAaa AUCAGGGC m6b Created HHHNE_17101_SLC3A2|NM_001012664|exon_CDS|-5.50497193615448|-2.36342903434111
hsa-miR-3186-5p ctggaACGCCTGaaa CAGGCGUC m7a Disrupted HHHNE_17101_SLC3A2|NM_001012664|exon_CDS|-5.50497193615448|-2.36342903434111
hsa-miR-3937 ctggaaCGCCTGaaa ACAGGCGG m6b Disrupted HHHNE_17101_SLC3A2|NM_001012664|exon_CDS|-5.50497193615448|-2.36342903434111
hsa-miR-6798-5p ctggaaCCCCTGaaa CCAGGGGG m6b Created HHHNE_17101_SLC3A2|NM_001012664|exon_CDS|-5.50497193615448|-2.36342903434111

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888620C>T COSM544400 TCGA-49-6743-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1343-5p gaggGCTCCCCtctt UGGGGAGC m7b Disrupted HHHNE_17101_SLC3A2|NM_001012664|exon_CDS|-5.50497193615448|-2.36342903434111
hsa-miR-671-5p gagGGCTTCCctctt AGGAAGCC m7b Created HHHNE_17101_SLC3A2|NM_001012664|exon_CDS|-5.50497193615448|-2.36342903434111
hsa-miR-6827-5p gagGGCTCCCctctt UGGGAGCC m7b Disrupted HHHNE_17101_SLC3A2|NM_001012664|exon_CDS|-5.50497193615448|-2.36342903434111
hsa-miR-6873-5p gagggctTCCCTCTt CAGAGGGA m7b Created HHHNE_17101_SLC3A2|NM_001012664|exon_CDS|-5.50497193615448|-2.36342903434111
hsa-miR-939-5p gaggGCTCCCCtctt UGGGGAGC m7b Disrupted HHHNE_17101_SLC3A2|NM_001012664|exon_CDS|-5.50497193615448|-2.36342903434111
hsa-miR-9500 gagggCTTCCCTctt AAGGGAAG m7b Created HHHNE_17101_SLC3A2|NM_001012664|exon_CDS|-5.50497193615448|-2.36342903434111

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888608G>A COSM1226355 587342 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6891-3p ccaggccATGAGGag CCCUCAUC m6b Created HHHNE_17101_SLC3A2|NM_001012664|exon_CDS|-5.50497193615448|-2.36342903434111
hsa-miR-7107-5p cCAGGCCGtgaggag UCGGCCUG m7b Disrupted HHHNE_17101_SLC3A2|NM_001012664|exon_CDS|-5.50497193615448|-2.36342903434111

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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