SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001013251
Gene Symbol: SLC3A2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888691T>C COSM4727367 T3021 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3181 cgcGGCCCGActtca AUCGGGCC m7b Created HHHNA_4344_SLC3A2|NM_001012664|exon_utr3|-4.74221645797338|0.951408831073139
hsa-miR-6781-5p cgCGGCCCGacttca CGGGCCGG m7a (m6a->m7a) HHHNA_4344_SLC3A2|NM_001012664|exon_utr3|-4.74221645797338|0.951408831073139

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888685G>A COSM4639342 LIM1215 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135b-3p cCCCTACAcggcctg AUGUAGGG m7b Created HHHNA_4344_SLC3A2|NM_001012664|exon_utr3|-4.74221645797338|0.951408831073139

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888679CCC>CTT COSM143466 cSCCP1 [skin][scalp][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4271 ccgCTTCCCCtacgcgg GGGGGAAG m7b Disrupted HHHNA_4344_SLC3A2|NM_001012664|exon_utr3|-4.74221645797338|0.951408831073139
hsa-miR-4725-3p ccgCTTCCCCtacgcgg UGGGGAAG m7b Disrupted HHHNA_4344_SLC3A2|NM_001012664|exon_utr3|-4.74221645797338|0.951408831073139
hsa-miR-651-3p ccgcTTCCTTTacgcgg AAAGGAAA m7a Created HHHNA_4344_SLC3A2|NM_001012664|exon_utr3|-4.74221645797338|0.951408831073139
hsa-miR-6780b-5p ccgCTTCCCCtacgcgg UGGGGAAG m7b Disrupted HHHNA_4344_SLC3A2|NM_001012664|exon_utr3|-4.74221645797338|0.951408831073139
hsa-miR-6783-5p ccgcTTCCCCTAcgcgg UAGGGGAA m8a Disrupted HHHNA_4344_SLC3A2|NM_001012664|exon_utr3|-4.74221645797338|0.951408831073139
hsa-miR-6824-5p ccgctTCCCCTACgcgg GUAGGGGA m8a Disrupted HHHNA_4344_SLC3A2|NM_001012664|exon_utr3|-4.74221645797338|0.951408831073139

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888526G>A COSM929859 TCGA-BG-A0M4-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6512-3p cctctcGGCTGGAct UUCCAGCC m7b Disrupted HHHNA_4343_SLC3A2|NM_001012664|exon_CDS|-4.89553533562727|1.14458318495431
hsa-miR-6720-5p cctctcGGCTGGAct UUCCAGCC m7b Disrupted HHHNA_4343_SLC3A2|NM_001012664|exon_CDS|-4.89553533562727|1.14458318495431
hsa-miR-6849-3p cctctcGGCTGGact ACCAGCCU m6b Disrupted HHHNA_4343_SLC3A2|NM_001012664|exon_CDS|-4.89553533562727|1.14458318495431

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888524C>T COSM3869773 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4691-3p ggcctctTGGCTGGa CCAGCCAC m7a Created HHHNA_4343_SLC3A2|NM_001012664|exon_CDS|-4.89553533562727|1.14458318495431

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888513T>C COSM2162018 T3080 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-662 ttggggACGTGGGcc UCCCACGU m7b Created HHHNA_4343_SLC3A2|NM_001012664|exon_CDS|-4.89553533562727|1.14458318495431
hsa-miR-6729-3p ttGGGGATGtgggcc UCAUCCCC m7b (m7b->m6b) HHHNA_4343_SLC3A2|NM_001012664|exon_CDS|-4.89553533562727|1.14458318495431

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888474C>A COSM1676121 MOLT-4 [haematopoietic_and_lymphoid_tissue][lymph_node][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-26b-3p actggGAACAGaatg CCUGUUCU m6b Created HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-3663-5p actggGACCAGaatg GCUGGUCU m6b Disrupted HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-4281 actGGGACCagaatg GGGUCCCG m6b Disrupted HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-4652-3p actgggAACAGAAtg GUUCUGUU m7b Created HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-4778-5p actgggaACAGAATg AAUUCUGU m7b Created HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-642b-5p actGGGAACagaatg GGUUCCCU m6b Created HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-7152-3p actgGGACCAGAatg UCUGGUCC m8a Disrupted HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888466C>A COSM4727366 T3225 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-199a-5p tatccgcCACTGGGa CCCAGUGU m7a Disrupted HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-199b-5p tatccgcCACTGGGa CCCAGUGU m7a Disrupted HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-25-5p taTCCGCCactggga AGGCGGAG m6b Disrupted HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-4730 taTCCGCCActggga CUGGCGGA m7b (m7b->m6b) HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-4754 taTCCGCAactggga AUGCGGAC m6b Created HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-5693 tatccGCCACTGgga GCAGUGGC m7b Disrupted HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-6850-5p taTCCGCAactggga GUGCGGAA m6b Created HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888464G>A COSM193660 TCGA-AA-3554-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-5p tataTCCGCCactgg AGGCGGAG m6b Disrupted HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-3165 tatATCCACCactgg AGGUGGAU m7b Created HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-376b-5p taTATCCACcactgg CGUGGAUA m7b (m6b->m7b) HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-376c-5p taTATCCACCactgg GGUGGAUA m8a Created HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-4730 tataTCCGCCActgg CUGGCGGA m7b Disrupted HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-5693 tatatccGCCACTGg GCAGUGGC m7b Disrupted HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218
hsa-miR-8071 tataTCCACCactgg CGGUGGAC m6b Created HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888432C>T COSM247398 P01-28 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7846-3p acgcgttCTCCGCTg CAGCGGAG m7b Disrupted HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62888429G>A COSM4146032 PTC-7C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6821-5p tCCACGCAttctccg GUGCGUGG m7b Created HHHNA_4342_SLC3A2|NM_001012664|exon_CDS|-5.36280891902708|2.82370490704218

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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