SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001012981
Gene Symbol: ZKSCAN2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.25237936T>C COSN6545944 ICGC_MB118 [central_nervous_system][brain][primitive_neuroectodermal_tumour-medulloblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6874-5p agtacAGCTCCATgt AUGGAGCU m8a Created HHHNA_8303_ZKSCAN2|NM_001012981|exon_utr3|-5.3563835496592|-0.423568735568729
hsa-miR-6500-5p agtacAGCTCCatgt AGGAGCUA m6b Created HHHNA_8303_ZKSCAN2|NM_001012981|exon_utr3|-5.3563835496592|-0.423568735568729
hsa-miR-4718 aGTACAGCTccatgt AGCUGUAC m8a (m7a->m8a) HHHNA_8303_ZKSCAN2|NM_001012981|exon_utr3|-5.3563835496592|-0.423568735568729
hsa-miR-4633-3p agtacAGCTCCatgt AGGAGCUA m6b Created HHHNA_8303_ZKSCAN2|NM_001012981|exon_utr3|-5.3563835496592|-0.423568735568729

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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