SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001012339
Gene Symbol: DNAJC21

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.34937461C>T COSM1204203 TCGA-CG-4305-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-3p aaagaTTTGGGacaa GCCCAAAG m6b Created HPTA3_14504_G23426.1_34937555
hsa-miR-4433a-5p aaagattTGGGACaa CGUCCCAC m6b Created HPTA3_14504_G23426.1_34937555
hsa-miR-4433b-5p aaagattTGGGACAa AUGUCCCA m7b Created HPTA3_14504_G23426.1_34937555
hsa-miR-4449 aaagattCGGGACaa CGUCCCGG m6b Disrupted HPTA3_14504_G23426.1_34937555
hsa-miR-4762-5p aaAGATTTGGgacaa CCAAAUCU m8a Created HPTA3_14504_G23426.1_34937555
hsa-miR-186-3p aaagaTTTGGGacaa GCCCAAAG m6b Created HPTA3_14504_G23426.1_34937555
hsa-miR-4433a-5p aaagattTGGGACaa CGUCCCAC m6b Created HPTA3_14504_G23426.1_34937555
hsa-miR-4433b-5p aaagattTGGGACAa AUGUCCCA m7b Created HPTA3_14504_G23426.1_34937555
hsa-miR-4449 aaagattCGGGACaa CGUCCCGG m6b Disrupted HPTA3_14504_G23426.1_34937555
hsa-miR-4762-5p aaAGATTTGGgacaa CCAAAUCU m8a Created HPTA3_14504_G23426.1_34937555

Mutation Mutation ID Sample Name Cancer Type
chr5:g.34937455A>G COSM3366050 TCGA-BP-4338-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6844 aaACAAAGAgattcg UUCUUUGU m7b (m6b->m7b) HPTA3_14504_G23426.1_34937555
hsa-miR-129-5p aaaCAAAAAGattcg CUUUUUGC m7a Disrupted HPTA3_14504_G23426.1_34937555
hsa-miR-130b-5p aaacAAAGAGattcg ACUCUUUC m6b Created HPTA3_14504_G23426.1_34937555
hsa-miR-216b-5p aaacaaAGAGATTcg AAAUCUCU m7b Created HPTA3_14504_G23426.1_34937555
hsa-miR-4753-3p aaacAAAGAGAttcg UUCUCUUU m7b Created HPTA3_14504_G23426.1_34937555
hsa-miR-6844 aaACAAAGAgattcg UUCUUUGU m7b (m6b->m7b) HPTA3_14504_G23426.1_34937555
hsa-miR-129-5p aaaCAAAAAGattcg CUUUUUGC m7a Disrupted HPTA3_14504_G23426.1_34937555
hsa-miR-130b-5p aaacAAAGAGattcg ACUCUUUC m6b Created HPTA3_14504_G23426.1_34937555
hsa-miR-216b-5p aaacaaAGAGATTcg AAAUCUCU m7b Created HPTA3_14504_G23426.1_34937555
hsa-miR-4753-3p aaacAAAGAGAttcg UUCUCUUU m7b Created HPTA3_14504_G23426.1_34937555

Mutation Mutation ID Sample Name Cancer Type
chr5:g.34937446G>T COSM1067457 TCGA-D1-A103-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser