SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001012339
Gene Symbol: DNAJC21

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.34954575C>A COSM2686842 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34c-5p tgtacaaACTGCCat AGGCAGUG m6b Created HPRT3_19741_G26396.1_34954689
hsa-miR-3613-5p tGTACAACctgccat UGUUGUAC m7b Disrupted HPRT3_19741_G26396.1_34954689
hsa-miR-449b-5p tgtacaaACTGCCat AGGCAGUG m6b Created HPRT3_19741_G26396.1_34954689
hsa-miR-4736 tgtacaACCTGCCat AGGCAGGU m7b Disrupted HPRT3_19741_G26396.1_34954689
hsa-miR-4763-3p tgtacaaCCTGCCat AGGCAGGG m6b Disrupted HPRT3_19741_G26396.1_34954689
hsa-miR-548au-3p tgtacaAACTGCCAt UGGCAGUU m8a Created HPRT3_19741_G26396.1_34954689
hsa-miR-657 tgtacAACCTGCCat GGCAGGUU m8a Disrupted HPRT3_19741_G26396.1_34954689
hsa-miR-7150 tgtacaaCCTGCCAt CUGGCAGG m7b Disrupted HPRT3_19741_G26396.1_34954689
hsa-miR-34c-5p tgtacaaACTGCCat AGGCAGUG m6b Created HPRT3_19741_G26396.1_34954689
hsa-miR-3613-5p tGTACAACctgccat UGUUGUAC m7b Disrupted HPRT3_19741_G26396.1_34954689
hsa-miR-449b-5p tgtacaaACTGCCat AGGCAGUG m6b Created HPRT3_19741_G26396.1_34954689
hsa-miR-4736 tgtacaACCTGCCat AGGCAGGU m7b Disrupted HPRT3_19741_G26396.1_34954689
hsa-miR-4763-3p tgtacaaCCTGCCat AGGCAGGG m6b Disrupted HPRT3_19741_G26396.1_34954689
hsa-miR-548au-3p tgtacaAACTGCCAt UGGCAGUU m8a Created HPRT3_19741_G26396.1_34954689
hsa-miR-657 tgtacAACCTGCCat GGCAGGUU m8a Disrupted HPRT3_19741_G26396.1_34954689
hsa-miR-7150 tgtacaaCCTGCCAt CUGGCAGG m7b Disrupted HPRT3_19741_G26396.1_34954689

Mutation Mutation ID Sample Name Cancer Type
chr5:g.34954571A>T COSM1193863 H2009 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-2-3p cagCTGTACAacctg CUGUACAG m7b Disrupted HPRT3_19741_G26396.1_34954689
hsa-let-7c-3p cagcTGTACAacctg CUGUACAA m6b Disrupted HPRT3_19741_G26396.1_34954689
hsa-let-7g-3p cagCTGTACAacctg CUGUACAG m7b Disrupted HPRT3_19741_G26396.1_34954689
hsa-miR-3613-5p cagctGTACAACctg UGUUGUAC m7b Disrupted HPRT3_19741_G26396.1_34954689

Mutation Mutation ID Sample Name Cancer Type
chr5:g.34954565A>T COSM353369 LUAD_E00522 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-214-3p tcttatCTGCTGTac ACAGCAGG m7a Created HPRT3_19741_G26396.1_34954689
hsa-miR-3120-3p tcttatcTGCTGTac CACAGCAA m6b Created HPRT3_19741_G26396.1_34954689
hsa-miR-3161 tCTTATCAGctgtac CUGAUAAG m8a (m8a->m7a) HPRT3_19741_G26396.1_34954689
hsa-miR-922 tcttaTCTGCTGtac GCAGCAGA m7b Created HPRT3_19741_G26396.1_34954689

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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