SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001012320
Gene Symbol: ZNF302

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.34684691C>T COSM1157915 8044814 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273a tcaGTCGCCactgga GGGCGACA m6b Disrupted HPRT3_12630_G16723.1_35175576
hsa-miR-194-3p tcagtcgCCACTGGa CCAGUGGG m7a Disrupted HPRT3_12630_G16723.1_35175576
hsa-miR-5190 tcagtcGTCACTGGa CCAGUGAC m8a Created HPRT3_12630_G16723.1_35175576
hsa-miR-5693 tcagtcGCCACTGga GCAGUGGC m7b Disrupted HPRT3_12630_G16723.1_35175576

Mutation Mutation ID Sample Name Cancer Type
chr19:g.34684687G>A COSM3756635 TCGA-AM-5820-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273a atcctcaGTCGCCac GGGCGACA m6b Disrupted HPRT3_12630_G16723.1_35175576
hsa-miR-6717-5p atcctcaATCGCCac AGGCGAUG m6b Created HPRT3_12630_G16723.1_35175576
hsa-miR-6857-3p atcCTCAGTCgccac UGACUGAG m7b Disrupted HPRT3_12630_G16723.1_35175576
hsa-miR-8053 atcctcAATCGCCAc UGGCGAUU m8a Created HPRT3_12630_G16723.1_35175576

Mutation Mutation ID Sample Name Cancer Type
chr19:g.34684686A>T COSM1524767 TCGA-95-7043-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273a aatcctcTGTCGCCa GGGCGACA m7b Created HPRT3_12630_G16723.1_35175576
hsa-miR-1273c aatcctcTGTCGCCa GGCGACAA m7a Created HPRT3_12630_G16723.1_35175576
hsa-miR-6847-5p aaTCCTCTGTcgcca ACAGAGGA m8a Created HPRT3_12630_G16723.1_35175576
hsa-miR-6857-3p aatcCTCAGTCgcca UGACUGAG m7b Disrupted HPRT3_12630_G16723.1_35175576

Mutation Mutation ID Sample Name Cancer Type
chr19:g.34684681T>C COSM3532330 TCGA-GN-A26A-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1185-5p cagtcaATCCTCagt AGAGGAUA m6b Disrupted HPRT3_12630_G16723.1_35175576
hsa-miR-296-3p cagtCAACCCTCagt GAGGGUUG m8a Created HPRT3_12630_G16723.1_35175576
hsa-miR-380-5p caGTCAACCctcagt UGGUUGAC m7b (m6b->m7b) HPRT3_12630_G16723.1_35175576
hsa-miR-563 caGTCAACCctcagt AGGUUGAC m7b (m6b->m7b) HPRT3_12630_G16723.1_35175576

Mutation Mutation ID Sample Name Cancer Type
chr19:g.34684401G>T COSM4438143 473 [soft_tissue][nerve_sheath][schwannoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1179 aGAATGCTacacatt AAGCAUUC m7b Created HPRT3_12629_G16722.1_35175317
hsa-miR-511-3p agaatgcTACACATt AAUGUGUA m7b Created HPRT3_12629_G16722.1_35175317

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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