SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001012320
Gene Symbol: ZNF302

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.34684865G>A COSM1304420 TCGA-DK-A1AC-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1251-3p accatCAAAGCactc CGCUUUGC m6b Created HPKTA_30531_G32813.1_35175770
hsa-miR-301a-5p accaTCAGAGCactc GCUCUGAC m7a Disrupted HPKTA_30531_G32813.1_35175770
hsa-miR-301b-5p accaTCAGAGCactc GCUCUGAC m7a Disrupted HPKTA_30531_G32813.1_35175770
hsa-miR-3194-3p accatCAGAGCactc AGCUCUGC m6b Disrupted HPKTA_30531_G32813.1_35175770
hsa-miR-4502 acCATCAGagcactc GCUGAUGA m6b Disrupted HPKTA_30531_G32813.1_35175770
hsa-miR-6805-3p accatCAGAGCActc UUGCUCUG m7b Disrupted HPKTA_30531_G32813.1_35175770
hsa-miR-5691 accatCAGAGCActc UUGCUCUG m7b Disrupted HPKTA_30531_G32813.1_35175770
hsa-miR-520f-3p accatcaAAGCACTc AAGUGCUU m7b Created HPKTA_30531_G32813.1_35175770

Mutation Mutation ID Sample Name Cancer Type
chr19:g.34684844C>G COSM3756636 TCGA-AM-5820-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-556-5p gccatgGCTCATCac GAUGAGCU m7a Disrupted HPKTA_30531_G32813.1_35175770
hsa-miR-6807-5p gccaTGGCTCAtcac GUGAGCCA m7b Disrupted HPKTA_30531_G32813.1_35175770
hsa-miR-1180-5p gccaTGGGTCatcac GGACCCAC m6b Created HPKTA_30531_G32813.1_35175770

Mutation Mutation ID Sample Name Cancer Type
chr19:g.34684507CA>C COSM1392751 TCGA-A6-6653-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3161 aatTTATCAaaaaagt CUGAUAAG m6b Disrupted HPKTA_30530_G32812.1_35175418

Mutation Mutation ID Sample Name Cancer Type
chr19:g.34684018G>GCT COSN4625682
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4797-5p acACTCTGTtcctgc GACAGAGU m7b (m7b->m6b) HPKTA_30529_G32811.1_35174914
hsa-miR-759 aCACTCTGCtttcctgc GCAGAGUG m8a (m7a->m8a) HPKTA_30529_G32811.1_35174914
hsa-miR-873-5p acactctGTTCCTGc GCAGGAAC m7b Disrupted HPKTA_30529_G32811.1_35174914

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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