SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010984
Gene Symbol: SPRTN

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.231354748T>G COSN5738664 HX25T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-490-3p tttCCAGGTTGgggc CAACCUGG m8a Created HHHNA_2703_SPRTN|NM_001261462|exon_utr3|-3.8719177545846|3.09310208557988
hsa-miR-619-3p ttTCCAGGTtggggc GACCUGGA m7b (m6b->m7b) HHHNA_2703_SPRTN|NM_001261462|exon_utr3|-3.8719177545846|3.09310208557988
hsa-miR-6793-3p tttccagGTTGGGGc UCCCCAAC m7b Created HHHNA_2703_SPRTN|NM_001261462|exon_utr3|-3.8719177545846|3.09310208557988
hsa-miR-875-3p TTTCCAGGttggggc CCUGGAAA m8a Created HHHNA_2703_SPRTN|NM_001261462|exon_utr3|-3.8719177545846|3.09310208557988

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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