SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010911
Gene Symbol: CASC10

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.21495674G>A COSM1627431 RK035_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4503 tcTGCTTAAtccctt UUUAAGCA m7b (m6b->m7b) HHKTA_39358_NM_001010911|794|833|1.94705734732907|0.205261879230262
hsa-miR-6792-5p tCTGCTTAatccctt GUAAGCAG m7b Created HHKTA_39358_NM_001010911|794|833|1.94705734732907|0.205261879230262

Mutation Mutation ID Sample Name Cancer Type
chr10:g.21495665A>G COSM916991 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6864-5p tCCCTTCAccctacc UUGAAGGG m7b Disrupted HHKTA_39358_NM_001010911|794|833|1.94705734732907|0.205261879230262
hsa-miR-3141 tcccttCGCCCTacc GAGGGCGG m6b Created HHKTA_39358_NM_001010911|794|833|1.94705734732907|0.205261879230262

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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