SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010891
Gene Symbol: MTX3

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.79988586C>A COSM1438845 TCGA-D5-6928-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1257 tggtttgATTCACaa AGUGAAUG m6b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-15b-3p tggttTGATTCacaa CGAAUCAU m6b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-3611 tggtttgCTTCACAa UUGUGAAG m7b Disrupted HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-6715b-3p tGGTTTGAttcacaa CUCAAACC m7b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-1257 tggtttgATTCACaa AGUGAAUG m6b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-15b-3p tggttTGATTCacaa CGAAUCAU m6b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-3611 tggtttgCTTCACAa UUGUGAAG m7b Disrupted HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-6715b-3p tGGTTTGAttcacaa CUCAAACC m7b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023

Mutation Mutation ID Sample Name Cancer Type
chr5:g.79988584T>G COSM3075377 TC71 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-3p gttTGCTGCacaaat AGCAGCAU m6b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-107 gttTGCTGCacaaat AGCAGCAU m6b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-143-5p gtttgCTGCACaaat GGUGCAGU m6b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-2113 gtttgctGCACAAAt AUUUGUGC m7b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-3611 gtttgCTTCACAAat UUGUGAAG m8a Disrupted HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-3944-5p gtttGCTGCACAaat UGUGCAGC m8a Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-545-3p gTTTGCTGcacaaat UCAGCAAA m7b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-103a-3p gttTGCTGCacaaat AGCAGCAU m6b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-107 gttTGCTGCacaaat AGCAGCAU m6b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-143-5p gtttgCTGCACaaat GGUGCAGU m6b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-2113 gtttgctGCACAAAt AUUUGUGC m7b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-3611 gtttgCTTCACAAat UUGUGAAG m8a Disrupted HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-3944-5p gtttGCTGCACAaat UGUGCAGC m8a Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023
hsa-miR-545-3p gTTTGCTGcacaaat UCAGCAAA m7b Created HHKTA_11674_NM_001167741|304|343|5.7546361598837|0.300570039125023

Mutation Mutation ID Sample Name Cancer Type
chr5:g.79988564G>C COSM3410445 TCGA-12-3652-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4766-5p ttcCTTTCAGtttga UCUGAAAG m7b Created HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-488-3p ttCCTTTCAgtttga UUGAAAGG m7b (m6b->m7b) HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-6730-5p ttCCTTTCagtttga AGAAAGGU m6b Created HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-888-5p ttccTTTGAGTttga UACUCAAA m7b Disrupted HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-4766-5p ttcCTTTCAGtttga UCUGAAAG m7b Created HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-488-3p ttCCTTTCAgtttga UUGAAAGG m7b (m6b->m7b) HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-6730-5p ttCCTTTCagtttga AGAAAGGU m6b Created HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-888-5p ttccTTTGAGTttga UACUCAAA m7b Disrupted HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023

Mutation Mutation ID Sample Name Cancer Type
chr5:g.79988563A>T COSM4778180 71 [endometrium][NS][hyperplasia][complex]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-888-5p tccTTTGAGTttgat UACUCAAA m7b Disrupted HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-888-5p tccTTTGAGTttgat UACUCAAA m7b Disrupted HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023

Mutation Mutation ID Sample Name Cancer Type
chr5:g.79988555C>T COSM3618255 TCGA-EE-A29M-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1910-3p gtttgatTCTGCCTg GAGGCAGA m7b Created HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-6511a-5p gtttgatTCTGCCTg CAGGCAGA m7b Created HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-6808-5p gtttgatCCTGCCTg CAGGCAGG m7b Disrupted HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-6893-5p gtttgatCCTGCCTg CAGGCAGG m7b Disrupted HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-940 gtttgatCCTGCCTg AAGGCAGG m7b Disrupted HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-1910-3p gtttgatTCTGCCTg GAGGCAGA m7b Created HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-6511a-5p gtttgatTCTGCCTg CAGGCAGA m7b Created HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-6808-5p gtttgatCCTGCCTg CAGGCAGG m7b Disrupted HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-6893-5p gtttgatCCTGCCTg CAGGCAGG m7b Disrupted HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023
hsa-miR-940 gtttgatCCTGCCTg AAGGCAGG m7b Disrupted HHKTA_37081_NM_001167741|344|383|2.03359322943259|0.300570039125023

Mutation Mutation ID Sample Name Cancer Type
chr5:g.79983175C>T COSN2118672 RK014_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1277-5p aagagacTATATTTa AAAUAUAU m7a Created HHKTA_49218_NM_001167741|1395|1434|1.38457411365623|0.300570039125023
hsa-miR-4474-5p aaGAGACTAtattta UUAGUCUC m7b (m6b->m7b) HHKTA_49218_NM_001167741|1395|1434|1.38457411365623|0.300570039125023
hsa-miR-4517 aagagacCATATTTa AAAUAUGA m7a Disrupted HHKTA_49218_NM_001167741|1395|1434|1.38457411365623|0.300570039125023
hsa-miR-5583-3p aagagaCCATATTta GAAUAUGG m7b Disrupted HHKTA_49218_NM_001167741|1395|1434|1.38457411365623|0.300570039125023
hsa-miR-6843-3p aaGAGACCATattta AUGGUCUC m8a Disrupted HHKTA_49218_NM_001167741|1395|1434|1.38457411365623|0.300570039125023
hsa-miR-6848-3p aaGAGACCAtattta GUGGUCUC m7b (m7b->m6b) HHKTA_49218_NM_001167741|1395|1434|1.38457411365623|0.300570039125023

Mutation Mutation ID Sample Name Cancer Type
chr5:g.79982702A>C COSN9957483 C0035T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-100-3p gtagtcaCAAGCTTt CAAGCUUG m7b Created HHKTA_39828_NM_001167741|1871|1910|1.90378940627731|0.300570039125023
hsa-miR-134-5p gtAGTCACAagcttt UGUGACUG m7a (m6a->m7a) HHKTA_39828_NM_001167741|1871|1910|1.90378940627731|0.300570039125023
hsa-miR-208a-5p gtagtcAAAAGCTtt GAGCUUUU m7b Disrupted HHKTA_39828_NM_001167741|1871|1910|1.90378940627731|0.300570039125023
hsa-miR-208b-5p gtagtcAAAAGCTTt AAGCUUUU m8a Disrupted HHKTA_39828_NM_001167741|1871|1910|1.90378940627731|0.300570039125023
hsa-miR-3118 gtAGTCACAagcttt UGUGACUG m7a (m6a->m7a) HHKTA_39828_NM_001167741|1871|1910|1.90378940627731|0.300570039125023
hsa-miR-3140-3p gtagtCAAAAGCTtt AGCUUUUG m8a Disrupted HHKTA_39828_NM_001167741|1871|1910|1.90378940627731|0.300570039125023
hsa-miR-3164 gtAGTCACAagcttt UGUGACUU m7a (m6a->m7a) HHKTA_39828_NM_001167741|1871|1910|1.90378940627731|0.300570039125023
hsa-miR-6808-3p gtaGTCACAagcttt GUGUGACC m6b Created HHKTA_39828_NM_001167741|1871|1910|1.90378940627731|0.300570039125023
hsa-miR-6820-3p gtAGTCACAagcttt UGUGACUU m7a (m6a->m7a) HHKTA_39828_NM_001167741|1871|1910|1.90378940627731|0.300570039125023
hsa-miR-758-3p gtaGTCACAAgcttt UUUGUGAC m7b Created HHKTA_39828_NM_001167741|1871|1910|1.90378940627731|0.300570039125023

Mutation Mutation ID Sample Name Cancer Type
chr5:g.79981392T>C COSN14777853 CHC205T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-337-5p gaactGCCGTTagcc GAACGGCU m6b Created HHKTA_21829_NM_001167741|3181|3220|3.3316314609853|0.300570039125023
hsa-miR-548al gaacTGCCGTTagcc AACGGCAA m7a Created HHKTA_21829_NM_001167741|3181|3220|3.3316314609853|0.300570039125023
hsa-miR-548au-3p gAACTGCCgttagcc UGGCAGUU m7b Created HHKTA_21829_NM_001167741|3181|3220|3.3316314609853|0.300570039125023

Mutation Mutation ID Sample Name Cancer Type
chr5:g.79980488G>T COSN7580843 8031073 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1224-3p caAGGTGGGcattaa CCCCACCU m7b (m7b->m6b) HHKTA_29402_NM_001167741|4079|4118|2.50954058100191|0.300570039125023
hsa-miR-1228-3p caAGGTGTGcattaa UCACACCU m7b (m6b->m7b) HHKTA_29402_NM_001167741|4079|4118|2.50954058100191|0.300570039125023
hsa-miR-365a-3p caaggtGGGCATTAa UAAUGCCC m8a Disrupted HHKTA_29402_NM_001167741|4079|4118|2.50954058100191|0.300570039125023
hsa-miR-365b-3p caaggtGGGCATTAa UAAUGCCC m8a Disrupted HHKTA_29402_NM_001167741|4079|4118|2.50954058100191|0.300570039125023
hsa-miR-501-3p caaggtGTGCATTaa AAUGCACC m7a Created HHKTA_29402_NM_001167741|4079|4118|2.50954058100191|0.300570039125023
hsa-miR-502-3p caaggtGTGCATTaa AAUGCACC m7a Created HHKTA_29402_NM_001167741|4079|4118|2.50954058100191|0.300570039125023
hsa-miR-5700 caaggtgTGCATTAa UAAUGCAU m7a Created HHKTA_29402_NM_001167741|4079|4118|2.50954058100191|0.300570039125023
hsa-miR-8064 caagGTGTGCattaa AGCACACU m6b Created HHKTA_29402_NM_001167741|4079|4118|2.50954058100191|0.300570039125023

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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