SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010883
Gene Symbol: FAM102B

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.108600620C>T COSM4795490 CHC892T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3941 ttaTGTGTAAaatga UUACACAC m7a Created HPKTA_1691_G1827.1_109143240
hsa-miR-4643 ttATGTGTaaaatga GACACAUG m6b Created HPKTA_1691_G1827.1_109143240
hsa-miR-466 ttATGTGTAaaatga AUACACAU m7b (m6b->m7b) HPKTA_1691_G1827.1_109143240
hsa-miR-4672 ttaTGTGTAAaatga UUACACAG m7a Created HPKTA_1691_G1827.1_109143240
hsa-miR-4789-3p tTATGTGTaaaatga CACACAUA m7b Created HPKTA_1691_G1827.1_109143240
hsa-miR-507 ttatGTGCAAAAtga UUUUGCAC m8a Disrupted HPKTA_1691_G1827.1_109143240
hsa-miR-557 ttatGTGCAAAatga GUUUGCAC m7b Disrupted HPKTA_1691_G1827.1_109143240
hsa-miR-5589-3p ttATGTGCAaaatga UGCACAUG m7a (m7a->m6a) HPKTA_1691_G1827.1_109143240
hsa-miR-3941 ttaTGTGTAAaatga UUACACAC m7a Created HPKTA_1691_G1827.1_109143240
hsa-miR-4643 ttATGTGTaaaatga GACACAUG m6b Created HPKTA_1691_G1827.1_109143240
hsa-miR-466 ttATGTGTAaaatga AUACACAU m7b (m6b->m7b) HPKTA_1691_G1827.1_109143240
hsa-miR-4672 ttaTGTGTAAaatga UUACACAG m7a Created HPKTA_1691_G1827.1_109143240
hsa-miR-4789-3p tTATGTGTaaaatga CACACAUA m7b Created HPKTA_1691_G1827.1_109143240
hsa-miR-507 ttatGTGCAAAAtga UUUUGCAC m8a Disrupted HPKTA_1691_G1827.1_109143240
hsa-miR-557 ttatGTGCAAAatga GUUUGCAC m7b Disrupted HPKTA_1691_G1827.1_109143240
hsa-miR-5589-3p ttATGTGCAaaatga UGCACAUG m7a (m7a->m6a) HPKTA_1691_G1827.1_109143240

Mutation Mutation ID Sample Name Cancer Type
chr1:g.108600608C>T COSM893348 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1252-3p agaagttCTCATTTa CAAAUGAG m7b Disrupted HPKTA_1691_G1827.1_109143240
hsa-miR-146a-5p agaAGTTCTCAttta UGAGAACU m8a Disrupted HPKTA_1691_G1827.1_109143240
hsa-miR-146b-5p agaAGTTCTCAttta UGAGAACU m8a Disrupted HPKTA_1691_G1827.1_109143240
hsa-miR-3646 agaagttTTCATTTa AAAAUGAA m7b Created HPKTA_1691_G1827.1_109143240
hsa-miR-5582-3p agAAGTTTTcattta UAAAACUU m7b (m6b->m7b) HPKTA_1691_G1827.1_109143240
hsa-miR-570-3p agaaGTTTTCattta CGAAAACA m6b Created HPKTA_1691_G1827.1_109143240
hsa-miR-7153-5p agaAGTTCTCAttta UGAGAACU m8a Disrupted HPKTA_1691_G1827.1_109143240
hsa-miR-1252-3p agaagttCTCATTTa CAAAUGAG m7b Disrupted HPKTA_1691_G1827.1_109143240
hsa-miR-146a-5p agaAGTTCTCAttta UGAGAACU m8a Disrupted HPKTA_1691_G1827.1_109143240
hsa-miR-146b-5p agaAGTTCTCAttta UGAGAACU m8a Disrupted HPKTA_1691_G1827.1_109143240
hsa-miR-3646 agaagttTTCATTTa AAAAUGAA m7b Created HPKTA_1691_G1827.1_109143240
hsa-miR-5582-3p agAAGTTTTcattta UAAAACUU m7b (m6b->m7b) HPKTA_1691_G1827.1_109143240
hsa-miR-570-3p agaaGTTTTCattta CGAAAACA m6b Created HPKTA_1691_G1827.1_109143240
hsa-miR-7153-5p agaAGTTCTCAttta UGAGAACU m8a Disrupted HPKTA_1691_G1827.1_109143240

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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