SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010879
Gene Symbol: ZIK1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.57590859C>T COSM3540470 TCGA-D9-A4Z3-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4753-5p agaaaGGCCTTataa CAAGGCCA m6b Disrupted HPTA3_9690_G15223.1_58102246
hsa-miR-6759-3p agAAAGGTCttataa UGACCUUU m7b (m6b->m7b) HPTA3_9690_G15223.1_58102246
hsa-miR-548ao-3p agaaaGGTCTTataa AAAGACCG m6b Created HPTA3_9690_G15223.1_58102246
hsa-miR-3667-5p agaaaGGTCTTataa AAAGACCC m6b Created HPTA3_9690_G15223.1_58102246
hsa-miR-3142 agaAAGGCCTTataa AAGGCCUU m8a Disrupted HPTA3_9690_G15223.1_58102246
hsa-miR-208b-3p agaaagGTCTTATaa AUAAGACG m7a Created HPTA3_9690_G15223.1_58102246
hsa-miR-208a-3p agaaagGTCTTATaa AUAAGACG m7a Created HPTA3_9690_G15223.1_58102246
hsa-miR-1245b-5p agaAAGGCCTtataa UAGGCCUU m7b Disrupted HPTA3_9690_G15223.1_58102246

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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