SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010879
Gene Symbol: ZIK1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.57592314T>C COSN4778807 tumor_4170686 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-329-3p ctGTGTGTactgtag AACACACC m6b Disrupted HPKMB_4138_G4708.1_58103680
hsa-miR-362-3p ctGTGTGTactgtag AACACACC m6b Disrupted HPKMB_4138_G4708.1_58103680
hsa-miR-3941 ctGTGTGTActgtag UUACACAC m7b (m7b->m6b) HPKMB_4138_G4708.1_58103680
hsa-miR-8064 ctGTGTGCactgtag AGCACACU m6b Created HPKMB_4138_G4708.1_58103680
hsa-miR-603 ctGTGTGTactgtag CACACACU m6b Disrupted HPKMB_4138_G4708.1_58103680
hsa-miR-101-3p ctgtgtGTACTGTAg UACAGUAC m8a Disrupted HPKMB_4138_G4708.1_58103680
hsa-miR-148a-3p ctgtgTGCACTGtag UCAGUGCA m7b Created HPKMB_4138_G4708.1_58103680
hsa-miR-148b-3p ctgtgTGCACTGtag UCAGUGCA m7b Created HPKMB_4138_G4708.1_58103680
hsa-miR-152-3p ctgtgTGCACTGtag UCAGUGCA m7b Created HPKMB_4138_G4708.1_58103680

Mutation Mutation ID Sample Name Cancer Type
chr19:g.57592300T>C COSN4778806 tumor_4170686 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4797-5p tgggtatCTCTGTac GACAGAGU m6b Created HPKMB_4138_G4708.1_58103680
hsa-miR-4756-3p tgggtATCTCTGtac CCAGAGAU m7b Created HPKMB_4138_G4708.1_58103680

Mutation Mutation ID Sample Name Cancer Type
chr19:g.57590612G>C COSM3990348 TCGA-G7-6793-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-150-5p ggccTTGGGAGtgca UCUCCCAA m7b Disrupted HPKMB_4137_G4707.1_58101972
hsa-miR-4708-3p gGCCTTGCgagtgca AGCAAGGC m7b Created HPKMB_4137_G4707.1_58101972
hsa-miR-6814-5p ggCCTTGGGAgtgca UCCCAAGG m8a Disrupted HPKMB_4137_G4707.1_58101972

Mutation Mutation ID Sample Name Cancer Type
chr19:g.57590604A>G COSM568336 TCGA-44-6145-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6886-3p tggaGAAGGGCcttg UGCCCUUC m7b Created HPKMB_4137_G4707.1_58101972
hsa-miR-6851-3p tggagAAGGGCCttg UGGCCCUU m7b Created HPKMB_4137_G4707.1_58101972
hsa-miR-5088-3p tggAGAAGGGccttg UCCCUUCU m7b Created HPKMB_4137_G4707.1_58101972
hsa-miR-1245b-5p tggagaAAGGCCTtg UAGGCCUU m7b Disrupted HPKMB_4137_G4707.1_58101972
hsa-miR-3142 tggagaAAGGCCTTg AAGGCCUU m8a Disrupted HPKMB_4137_G4707.1_58101972

Mutation Mutation ID Sample Name Cancer Type
chr19:g.57590604A>C COSM1002348 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1245b-5p tggagaAAGGCCTtg UAGGCCUU m7b Disrupted HPKMB_4137_G4707.1_58101972
hsa-miR-3142 tggagaAAGGCCTTg AAGGCCUU m8a Disrupted HPKMB_4137_G4707.1_58101972

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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