SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010879
Gene Symbol: ZIK1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.57590859C>T COSM3540470 TCGA-D9-A4Z3-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1245b-5p agaAAGGCCTtataa UAGGCCUU m7b Disrupted HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-208a-3p agaaagGTCTTATaa AUAAGACG m7a Created HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-208b-3p agaaagGTCTTATaa AUAAGACG m7a Created HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-3142 agaAAGGCCTTataa AAGGCCUU m8a Disrupted HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-3667-5p agaaaGGTCTTataa AAAGACCC m6b Created HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-4753-5p agaaaGGCCTTataa CAAGGCCA m6b Disrupted HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-548ao-3p agaaaGGTCTTataa AAAGACCG m6b Created HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-6759-3p agAAAGGTCttataa UGACCUUU m7b (m6b->m7b) HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718

Mutation Mutation ID Sample Name Cancer Type
chr19:g.57590856A>C COSM4742828 T2269 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1245b-5p tggagaAAGGCCTta UAGGCCUU m7b Disrupted HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-3142 tggagaAAGGCCTTa AAGGCCUU m8a Disrupted HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718

Mutation Mutation ID Sample Name Cancer Type
chr19:g.57590853G>A COSM327551 10 [breast][NS][carcinoma_in_situ][ductal_and_lobular_carcinoma_in_situ]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3180-5p caCTGGAAaaaggcc CUUCCAGA m6b Created HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-3925-3p cACTGGAGaaaggcc ACUCCAGU m7b Disrupted HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-515-5p cacTGGAGAAaggcc UUCUCCAA m7a Disrupted HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-519e-5p cacTGGAGAAaggcc UUCUCCAA m7a Disrupted HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-629-3p cactGGAGAAaggcc GUUCUCCC m6b Disrupted HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-766-3p caCTGGAGaaaggcc ACUCCAGC m6b Disrupted HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718

Mutation Mutation ID Sample Name Cancer Type
chr19:g.57590839G>T COSM1002351 TCGA-D1-A103-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4680-5p caccaaAGAGTTCac AGAACUCU m7b Disrupted HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-5002-5p cACCAAATagttcac AAUUUGGU m7b Created HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-7158-3p caccaaaTAGTTCAc CUGAACUA m7b Created HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718
hsa-miR-9-5p cACCAAAGAgttcac UCUUUGGU m8a (m8a->m7a) HHKTA_36150_NM_001010879|1124|1163|2.07686117048434|0.489843166530718

Mutation Mutation ID Sample Name Cancer Type
chr19:g.57590218A>G COSM4154386 C0037T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p cagcaccAGAAGCat AGCUUCUU m6b Disrupted HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718
hsa-miR-1250-5p cAGCACCGgaagcat ACGGUGCU m7b Created HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718
hsa-miR-2115-5p cagcaccGGAAGCat AGCUUCCA m6b Created HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718
hsa-miR-3182 cagcacCAGAAGCat GCUUCUGU m7a Disrupted HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718
hsa-miR-4299 cagCACCAGaagcat GCUGGUGA m6b Disrupted HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718
hsa-miR-4456 cagCACCAGaagcat CCUGGUGG m6b Disrupted HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718
hsa-miR-4664-3p cagcACCGGAAGcat CUUCCGGU m8a Created HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718
hsa-miR-548q caGCACCAGaagcat GCUGGUGC m7b (m7b->m6b) HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718
hsa-miR-7978 cagCACCAGAagcat UCUGGUGU m7a Disrupted HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718

Mutation Mutation ID Sample Name Cancer Type
chr19:g.57590190G>A COSM1712992 YUDIALE [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4684-5p cttggtTAGAGAatg CUCUCUAC m6b Created HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718
hsa-miR-515-5p cttggTTGGAGAAtg UUCUCCAA m8a Disrupted HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718
hsa-miR-519d-5p cttggTTGGAGaatg CCUCCAAA m6b Disrupted HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718
hsa-miR-519e-5p cttggTTGGAGAAtg UUCUCCAA m8a Disrupted HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718
hsa-miR-520f-5p cttggTTAGAGaatg CCUCUAAA m6b Created HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718
hsa-miR-5695 cttggTTGGAGaatg ACUCCAAG m6b Disrupted HHKTA_32864_NM_001010879|466|505|2.24993293469137|0.489843166530718

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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