SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010875
Gene Symbol: SLC25A30

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.45402304C>T COSM4495798 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4490 catTTACCAGcaaga UCUGGUAA m7b Disrupted HHHNE_16923_SLC25A30|NM_001010875|exon_CDS|-5.12781091462949|-0.900367797416001
hsa-miR-8086 catttACTAGCAaga UGCUAGUC m7a Created HHHNE_16923_SLC25A30|NM_001010875|exon_CDS|-5.12781091462949|-0.900367797416001
hsa-miR-628-3p catTTACTAGcaaga UCUAGUAA m7b Created HHHNE_16923_SLC25A30|NM_001010875|exon_CDS|-5.12781091462949|-0.900367797416001
hsa-miR-6131 catttACCAGCaaga GGCUGGUC m6b Disrupted HHHNE_16923_SLC25A30|NM_001010875|exon_CDS|-5.12781091462949|-0.900367797416001
hsa-miR-449c-3p catttACTAGCAAga UUGCUAGU m8a Created HHHNE_16923_SLC25A30|NM_001010875|exon_CDS|-5.12781091462949|-0.900367797416001
hsa-miR-138-5p catttACCAGCaaga AGCUGGUG m6b Disrupted HHHNE_16923_SLC25A30|NM_001010875|exon_CDS|-5.12781091462949|-0.900367797416001
hsa-miR-133a-5p cattTACCAGCaaga AGCUGGUA m7b Disrupted HHHNE_16923_SLC25A30|NM_001010875|exon_CDS|-5.12781091462949|-0.900367797416001

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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