SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001010872
Gene Symbol: FAM83B
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr6:g.54870314A>G COSM1080386 TCGA-B5-A11J-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4316 gaGCCTCACtacaag GGUGAGGC m7b (m7b->m6b) HPTA3_16020_G25729.1_54735105
hsa-miR-921 gagcCTCACTAcaag CUAGUGAG m7b Disrupted HPTA3_16020_G25729.1_54735105
hsa-miR-6073 gagccTCACTACaag GGUAGUGA m7b Disrupted HPTA3_16020_G25729.1_54735105
hsa-miR-381-5p gagCCTCGCTacaag AGCGAGGU m7a Created HPTA3_16020_G25729.1_54735105
hsa-miR-2467-5p GAGCCTCActacaag UGAGGCUC m8a Disrupted HPTA3_16020_G25729.1_54735105
hsa-miR-142-3p gagcctCACTACAag UGUAGUGU m7a Disrupted HPTA3_16020_G25729.1_54735105

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser