SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010872
Gene Symbol: FAM83B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.54941850G>A COSM1080411 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1262 ataaaTCACCCAgaa AUGGGUGA m7b Created HPRO6_65801_G78567.1_54806629
hsa-miR-1285-3p ataaatcGCCCAGAa UCUGGGCA m7a Disrupted HPRO6_65801_G78567.1_54806629
hsa-miR-3187-5p ataaatcGCCCAGaa CCUGGGCA m6b Disrupted HPRO6_65801_G78567.1_54806629
hsa-miR-378g ataaatcGCCCAGaa ACUGGGCU m6b Disrupted HPRO6_65801_G78567.1_54806629
hsa-miR-4486 ataaatCGCCCAGaa GCUGGGCG m7b Disrupted HPRO6_65801_G78567.1_54806629
hsa-miR-4701-3p ataaaTCACCCAgaa AUGGGUGA m7b Created HPRO6_65801_G78567.1_54806629
hsa-miR-5189-5p ataaatcGCCCAGAa UCUGGGCA m7a Disrupted HPRO6_65801_G78567.1_54806629
hsa-miR-612 ataaatcGCCCAGaa GCUGGGCA m6b Disrupted HPRO6_65801_G78567.1_54806629
hsa-miR-6736-5p ataaaTCACCCAGaa CUGGGUGA m8a Created HPRO6_65801_G78567.1_54806629
hsa-miR-6776-5p ataaatCACCCAGAa UCUGGGUG m8a Created HPRO6_65801_G78567.1_54806629
hsa-miR-6860 ataaatcGCCCAGaa ACUGGGCA m6b Disrupted HPRO6_65801_G78567.1_54806629
hsa-miR-6861-5p ataaatcACCCAGaa ACUGGGUA m6b Created HPRO6_65801_G78567.1_54806629
hsa-miR-8053 ataAATCGCCcagaa UGGCGAUU m7b Disrupted HPRO6_65801_G78567.1_54806629

Mutation Mutation ID Sample Name Cancer Type
chr6:g.54941849C>T COSM223102 ME009T [skin][trunk][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1285-3p tataaatTGCCCAGa UCUGGGCA m7b Created HPRO6_65801_G78567.1_54806629
hsa-miR-3187-5p tataaatTGCCCAGa CCUGGGCA m7b Created HPRO6_65801_G78567.1_54806629
hsa-miR-4486 tataaatCGCCCAGa GCUGGGCG m7b Disrupted HPRO6_65801_G78567.1_54806629
hsa-miR-5189-5p tataaatTGCCCAGa UCUGGGCA m7b Created HPRO6_65801_G78567.1_54806629
hsa-miR-612 tataaatTGCCCAGa GCUGGGCA m7b Created HPRO6_65801_G78567.1_54806629
hsa-miR-6860 tataaatTGCCCAGa ACUGGGCA m7b Created HPRO6_65801_G78567.1_54806629
hsa-miR-8053 tataAATCGCCcaga UGGCGAUU m7b Disrupted HPRO6_65801_G78567.1_54806629

Mutation Mutation ID Sample Name Cancer Type
chr6:g.54941846A>C COSM214228 SA084 [breast][NS][carcinoma][basal_(triple-negative)_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3171 cagtATACATCgccc AGAUGUAU m7b Created HPRO6_65801_G78567.1_54806629
hsa-miR-6717-5p cagtataCATCGCCc AGGCGAUG m7b Created HPRO6_65801_G78567.1_54806629
hsa-miR-8053 cagtataAATCGCCc UGGCGAUU m7b Disrupted HPRO6_65801_G78567.1_54806629

Mutation Mutation ID Sample Name Cancer Type
chr6:g.54941838C>T COSM3355631 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3145-3p ccAAATATCagtata AGAUAUUU m7b (m6b->m7b) HPRO6_65801_G78567.1_54806629
hsa-miR-4774-5p ccaaATACCAGtata UCUGGUAU m7b Disrupted HPRO6_65801_G78567.1_54806629
hsa-miR-5681b ccaAATACCagtata AGGUAUUG m6b Disrupted HPRO6_65801_G78567.1_54806629

Mutation Mutation ID Sample Name Cancer Type
chr6:g.54941838C>A COSM1547118 TCGA-86-6851-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-452-5p ccaaatAACAGTata AACUGUUU m6b Created HPRO6_65801_G78567.1_54806629
hsa-miR-4676-3p ccaaatAACAGTata CACUGUUU m6b Created HPRO6_65801_G78567.1_54806629
hsa-miR-4693-5p ccaaataACAGTATa AUACUGUG m7a Created HPRO6_65801_G78567.1_54806629
hsa-miR-4774-5p ccaaATACCAGtata UCUGGUAU m7b Disrupted HPRO6_65801_G78567.1_54806629
hsa-miR-5681b ccaAATACCagtata AGGUAUUG m6b Disrupted HPRO6_65801_G78567.1_54806629
hsa-miR-892c-3p ccaaatAACAGTata CACUGUUU m6b Created HPRO6_65801_G78567.1_54806629

Mutation Mutation ID Sample Name Cancer Type
chr6:g.54941195G>T COSM4423626 2171684 [central_nervous_system][thalamus][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15a-5p catTGCTGCTttact UAGCAGCA m7b Disrupted HPRO6_65800_G78566.1_54805988
hsa-miR-15b-5p catTGCTGCTttact UAGCAGCA m7b Disrupted HPRO6_65800_G78566.1_54805988
hsa-miR-16-5p catTGCTGCTttact UAGCAGCA m7b Disrupted HPRO6_65800_G78566.1_54805988
hsa-miR-186-5p cattgcTTCTTTact CAAAGAAU m6b Created HPRO6_65800_G78566.1_54805988
hsa-miR-195-5p catTGCTGCTttact UAGCAGCA m7b Disrupted HPRO6_65800_G78566.1_54805988
hsa-miR-424-5p catTGCTGCTttact CAGCAGCA m7b Disrupted HPRO6_65800_G78566.1_54805988
hsa-miR-4422 cattgcTGCTTTact AAAAGCAU m6b Disrupted HPRO6_65800_G78566.1_54805988
hsa-miR-497-5p catTGCTGCTttact CAGCAGCA m7b Disrupted HPRO6_65800_G78566.1_54805988
hsa-miR-6835-3p cattgcTGCTTTact AAAAGCAC m6b Disrupted HPRO6_65800_G78566.1_54805988
hsa-miR-6838-5p catTGCTGCTTtact AAGCAGCA m8a Disrupted HPRO6_65800_G78566.1_54805988

Mutation Mutation ID Sample Name Cancer Type
chr6:g.54941187C>T COSM3628683 TCGA-D3-A2JD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3688-3p tcagTTTCCATtgct UAUGGAAA m7b Disrupted HPRO6_65800_G78566.1_54805988
hsa-miR-4261 tcaGTTTCCattgct AGGAAACA m6b Disrupted HPRO6_65800_G78566.1_54805988
hsa-miR-4738-3p tCAGTTTCcattgct UGAAACUG m7b Disrupted HPRO6_65800_G78566.1_54805988
hsa-miR-548a-3p tCAGTTTTcattgct CAAAACUG m7b Created HPRO6_65800_G78566.1_54805988
hsa-miR-548ar-3p tCAGTTTTcattgct UAAAACUG m7b Created HPRO6_65800_G78566.1_54805988
hsa-miR-548az-3p tCAGTTTTcattgct AAAAACUG m7b Created HPRO6_65800_G78566.1_54805988
hsa-miR-548e-3p tCAGTTTTcattgct AAAAACUG m7b Created HPRO6_65800_G78566.1_54805988
hsa-miR-548f-3p tCAGTTTTcattgct AAAAACUG m7b Created HPRO6_65800_G78566.1_54805988
hsa-miR-570-3p tcaGTTTTCattgct CGAAAACA m6b Created HPRO6_65800_G78566.1_54805988

Mutation Mutation ID Sample Name Cancer Type
chr6:g.54870314A>G COSM1080386 TCGA-B5-A11J-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-142-3p gagcctCACTACAag UGUAGUGU m7a Disrupted HPRO6_65799_G78563.1_54735105
hsa-miR-2467-5p GAGCCTCActacaag UGAGGCUC m8a Disrupted HPRO6_65799_G78563.1_54735105
hsa-miR-381-5p gagCCTCGCTacaag AGCGAGGU m7a Created HPRO6_65799_G78563.1_54735105
hsa-miR-4316 gaGCCTCACtacaag GGUGAGGC m7b (m7b->m6b) HPRO6_65799_G78563.1_54735105
hsa-miR-6073 gagccTCACTACaag GGUAGUGA m7b Disrupted HPRO6_65799_G78563.1_54735105
hsa-miR-921 gagcCTCACTAcaag CUAGUGAG m7b Disrupted HPRO6_65799_G78563.1_54735105

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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