SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010867
Gene Symbol: IBA57

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.228175212A>C COSM3977133 304_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-9-5p ttcACCAAAGgctgc UCUUUGGU m7b Disrupted HPKTA_3429_G3656.1_228362926
hsa-miR-7855-5p tTCACCAAaggctgc UUGGUGAG m7a Disrupted HPKTA_3429_G3656.1_228362926
hsa-miR-6811-3p ttcacCACAGGCTgc AGCCUGUG m8a Created HPKTA_3429_G3656.1_228362926

Mutation Mutation ID Sample Name Cancer Type
chr1:g.228175205T>C COSM1962867 RKO [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4792 cgtgagcCTCACCaa CGGUGAGC m6b Created HPKTA_3429_G3656.1_228362926
hsa-miR-485-5p cgtgAGCCTCaccaa AGAGGCUG m6b Created HPKTA_3429_G3656.1_228362926
hsa-miR-6796-3p cgtGAGCTTCaccaa GAAGCUCU m7a Disrupted HPKTA_3429_G3656.1_228362926
hsa-miR-6806-3p cgtGAGCTTCAccaa UGAAGCUC m8a Disrupted HPKTA_3429_G3656.1_228362926
hsa-miR-6884-5p cgtgAGCCTCaccaa AGAGGCUG m6b Created HPKTA_3429_G3656.1_228362926
hsa-miR-7855-5p cgtgagcCTCACCAa UUGGUGAG m7b Created HPKTA_3429_G3656.1_228362926
hsa-miR-4710 cgtgagCCTCACCaa GGGUGAGG m7b Created HPKTA_3429_G3656.1_228362926
hsa-miR-127-5p cgtgAGCTTCAccaa CUGAAGCU m7b Disrupted HPKTA_3429_G3656.1_228362926
hsa-miR-2467-5p cgtGAGCCTCAccaa UGAGGCUC m8a Created HPKTA_3429_G3656.1_228362926
hsa-miR-3188 cgtgAGCCTCaccaa AGAGGCUU m6b Created HPKTA_3429_G3656.1_228362926
hsa-miR-4316 cgtgaGCCTCACCaa GGUGAGGC m8a Created HPKTA_3429_G3656.1_228362926
hsa-miR-4284 cGTGAGCCtcaccaa GGGCUCAC m7b Created HPKTA_3429_G3656.1_228362926
hsa-miR-3928-5p cgtGAGCTTCAccaa UGAAGCUC m8a Disrupted HPKTA_3429_G3656.1_228362926

Mutation Mutation ID Sample Name Cancer Type
chr1:g.228175203G>A COSM4764702 pfg052T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-127-5p ggcgtgAGCTTCAcc CUGAAGCU m7b Disrupted HPKTA_3429_G3656.1_228362926
hsa-miR-3928-5p ggcgtGAGCTTCAcc UGAAGCUC m8a Disrupted HPKTA_3429_G3656.1_228362926
hsa-miR-6796-3p ggcgtGAGCTTCacc GAAGCUCU m7a Disrupted HPKTA_3429_G3656.1_228362926
hsa-miR-6806-3p ggcgtGAGCTTCAcc UGAAGCUC m8a Disrupted HPKTA_3429_G3656.1_228362926

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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