SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010867
Gene Symbol: IBA57

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.228175391G>A COSM1962874 TCGA-CG-5721-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-744-3p gGGCAACAtggggct CUGUUGCC m7b Created HHHNA_2643_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-3189-5p gggcaacATGGGGCt UGCCCCAU m7b Created HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-4716-5p gggcAACATGGggct UCCAUGUU m7b Created HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-4758-3p gggcaacGTGGGGCt UGCCCCAC m7b Disrupted HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-662 gggcaACGTGGGgct UCCCACGU m7b Disrupted HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-744-3p gGGCAACAtggggct CUGUUGCC m7b Created HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-662 gggcaACGTGGGgct UCCCACGU m7b Disrupted HHHNA_2643_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-4758-3p gggcaacGTGGGGCt UGCCCCAC m7b Disrupted HHHNA_2643_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-4716-5p gggcAACATGGggct UCCAUGUU m7b Created HHHNA_2643_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-3189-5p gggcaacATGGGGCt UGCCCCAU m7b Created HHHNA_2643_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755

Mutation Mutation ID Sample Name Cancer Type
chr1:g.228175381C>T COSM679286 TCGA-39-5030-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4732-3p gggctgGTCAGGGCa GCCCUGAC m8a Created HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-7976 gggctggTCAGGGCa UGCCCUGA m7b Created HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-3190-5p gggcTGGCCAGggca UCUGGCCA m7b Disrupted HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-3194-5p gGGCTGGCCagggca GGCCAGCC m8a (m8a->m7a) HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-345-3p gggctggTCAGGGCa GCCCUGAA m7a Created HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-4435 gggCTGGCCAgggca AUGGCCAG m7b Disrupted HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755

Mutation Mutation ID Sample Name Cancer Type
chr1:g.228175372C>T COSM3484439 TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4539 gcaAGTTCAGggctg GCUGAACU m7b Disrupted HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-345-3p gcaagTTCAGGGCtg GCCCUGAA m8a Disrupted HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-18b-3p gcaagtTTAGGGCtg UGCCCUAA m7b Created HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-6779-3p gcaagttCAGGGCTg AAGCCCUG m7b Disrupted HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755
hsa-miR-7976 gcaagtTCAGGGCtg UGCCCUGA m7b Disrupted HHHNA_2642_IBA57|NM_001010867|exon_CDS|-4.43114172453026|-0.229792430330755

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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