SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001010858
Gene Symbol: RNF187

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.228487479G>A COSN7207045 8052570 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4767 ccccgcCGCCCGCag CGCGGGCG m7b Disrupted HHHNA_2668_RNF187|NM_001010858|exon_utr5|-4.27507558591684|-0.324336523280087
hsa-miR-6787-5p CCCCGCCAcccgcag UGGCGGGG m8a Created HHHNA_2668_RNF187|NM_001010858|exon_utr5|-4.27507558591684|-0.324336523280087
hsa-miR-8072 ccCCGCCGCCcgcag GGCGGCGG m8a Disrupted HHHNA_2668_RNF187|NM_001010858|exon_utr5|-4.27507558591684|-0.324336523280087
hsa-miR-4467 cccCGCCGCCcgcag UGGCGGCG m7b Disrupted HHHNA_2668_RNF187|NM_001010858|exon_utr5|-4.27507558591684|-0.324336523280087
hsa-miR-3960 ccCCGCCGCCcgcag GGCGGCGG m8a Disrupted HHHNA_2668_RNF187|NM_001010858|exon_utr5|-4.27507558591684|-0.324336523280087
hsa-miR-3656 ccccgcCACCCGCag GGCGGGUG m7b Created HHHNA_2668_RNF187|NM_001010858|exon_utr5|-4.27507558591684|-0.324336523280087
hsa-miR-3621 ccccgccACCCGCag CGCGGGUC m6b Created HHHNA_2668_RNF187|NM_001010858|exon_utr5|-4.27507558591684|-0.324336523280087
hsa-miR-1908-5p CCCCGCCGcccgcag CGGCGGGG m8a Disrupted HHHNA_2668_RNF187|NM_001010858|exon_utr5|-4.27507558591684|-0.324336523280087

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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